Thermosediminibacter oceani: Toce_1189
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Entry
Toce_1189 CDS
T01289
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
toc
Thermosediminibacter oceani
Pathway
toc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Toce_1189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_1189
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Toce_1189
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ADL07947
UniProt:
D9S3H0
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Position
complement(1159119..1161710)
Genome browser
AA seq
863 aa
AA seq
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MDTPMLKQYREIKEKYKDYIVFFRLGDFYEMFFDDAHIAARELEIALTSRDPENRVPMAG
VPYHAADQYIYKLISKGYKVVICEQVEDPKQAKGIVKREVVKIITPGTITEISALEEKKN
NYLVCIYRENNDFGIAATDLMTGEFLTTEIHCAYPYQELLDELSKLEPRECLVNAGFLQD
TFLNKAVNTNFNILLTFKENDYFQAESARELLMSQFSGNELEDIFKRPFATIASGACLNY
LRETQRLSLSHINSIRYYERTEYMALDVTCRRNLELTQSLMDGKKQGSLLWVLDKTVTSM
GGRTLRKWIEQPLIDIIKIKERQDAVEELYQNYFLRQELREQLKNLYDLERLTGKLVCGN
LNARDLLAIKNTVKHFPKIKELLAGCRSKLLITLYNELDLLNDVYELLEKAINDDPPISV
KEGGIIKDGFDSEVDRLRKASTEGKSWIAELERKERERTGIKSLKVGYNKVFGYYIEITK
ANLSLVPKDYIRKQTLANGERFITEELKEYESLIMGAEEKLLDLEYQIFCKIREDLITKI
TRLKKSAQVVSVLDALVSLAEVASSNNYVKPELTLNDEINIVEGRHPVVELTLKDEMFIP
NDTHINCSDSMISIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAQIGIVDRIFTRI
GASDNLASGQSTFMVEMTEVANILKHATPKSLLILDEIGRGTSTYDGLSIAWAVIEYIHK
NIKAKTLFATHYHEITQLKKLKGVKNFKVMVKERGEDIIFLRKIVPGEADRSYGIEVAKL
AGLPKSVILRAQEILKDLEQNDGARAREPQIAATKDTPFDDVQLNIESLKNEQVIRMIKE
LDINTITPLEALNLLYSIKQKII
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatactccgatgttaaaacagtacagagagattaaagaaaagtacaaagactatatc
gtgtttttccgcctcggggatttttacgaaatgttttttgacgatgctcacatagccgcc
cgggagctagagatcgctctaacctcaagggaccctgaaaatagagtgccaatggccggg
gtcccttatcatgcagcagatcagtatatatataagctcatcagcaaaggttacaaagtt
gtaatatgtgagcaggtggaagatcccaaacaggcaaagggaatagtaaaacgagaagtc
gtaaaaatcataaccccgggcaccatcacggaaattagcgcgctggaggaaaagaagaat
aattatctggtgtgcatatacagagaaaataacgatttcggaatagcagcgacggacctg
atgacaggtgaatttctaactactgaaatacactgtgcttatccctatcaggaactactt
gatgagctttcaaagcttgaaccgcgagaatgccttgtcaatgccggatttttacaagat
acgttccttaataaggctgtaaatacaaatttcaatattctcctcacttttaaagaaaac
gattactttcaggcagagtcagctagagagcttttaatgtctcaattcagcggaaacgag
ctagaagacattttcaaaaggccttttgccactattgcctcgggtgcatgccttaactac
cttagagaaacccagaggctttctttaagtcacattaactccattaggtattacgagaga
accgaatacatggctctagacgtaacctgtaggaggaacctggaactgacccagtccctc
atggacggtaaaaagcaggggagtttattatgggtccttgataagaccgtaacgtccatg
gggggcaggaccctgagaaaatggattgaacaacctttaatagacatcataaaaataaaa
gagaggcaggatgccgtagaagaactgtatcaaaactattttttaaggcaggaactcagg
gagcagcttaaaaacctctatgaccttgaaagattgacgggaaagttggtctgtggaaac
cttaacgccagggacctcctggctataaaaaacacagtaaagcattttccgaaaataaag
gagttactggccgggtgccggtcaaaattactgataacgctatacaatgaattggatctg
ctgaatgacgtgtacgaacttttagagaaagcaataaacgacgatccacccatatcagtt
aaagaaggaggcataataaaagacgggtttgactcagaagtagatagattaagaaaagct
tccactgaaggtaaatcatggatagccgaacttgaaagaaaagagcgggaaagaaccggt
ataaaatcgctaaaagttggctataacaaggttttcggttattatattgaaataacaaaa
gctaatttgtctctggttccaaaggattatataaggaaacagactctagccaacggagag
aggtttatcaccgaagagttaaaggaatacgaatcactcataatgggtgccgaggaaaaa
ctgctggaccttgaataccagattttctgcaaaatccgggaagacctgattaccaaaatc
accagactgaaaaaaagtgctcaggtagtttcggttcttgatgcgcttgtatcgttggct
gaggtagcttccagcaataattacgtcaaacctgagctcacattaaacgacgaaataaat
atagtggaaggccgtcatcctgtagtcgaattgactttaaaggatgaaatgttcataccc
aatgacactcatataaactgcagcgattccatgatatcgatcataacgggccctaatatg
gccgggaaatccacctacatgaggcaggtagcattaatcgtacttatggcccagataggg
agctttgtaccggctaaaagtgcccaaatcggtattgtggaccgtatatttacccgtatt
ggcgcttcagacaacctagcctctggacagagcacctttatggtggaaatgaccgaggtg
gccaatattttgaagcatgcaactcccaagagcttgctcatactcgatgagataggtcga
ggtaccagcacttacgacggcttgagcatcgcttgggccgtaattgaatacatacacaaa
aatataaaggcaaaaaccctttttgccacccactaccatgaaataacccaactcaaaaag
ctcaagggagtaaaaaacttcaaagtgatggtaaaagagcgaggagaagatatcatattc
ttgagaaaaatcgtgcccggcgaggccgatagaagttacggtatcgaagtggccaaactt
gcaggcttacctaaaagcgtaatactgagggctcaggaaatcctgaaggatctggaacaa
aatgacggcgcaagggctagagaacctcaaatagcggcaacgaaagatacgcctttcgat
gatgtccagctcaatattgagagtttaaagaacgagcaggttatccgcatgataaaggag
ctggatataaatacgataactccgctggaggctttgaacttactctattcaataaaacaa
aagattatttga
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