Thermosediminibacter oceani: Toce_1221
Help
Entry
Toce_1221 CDS
T01289
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
toc03009
]
Toce_1221
Enzymes [BR:
toc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Toce_1221
Ribosome biogenesis [BR:
toc03009
]
Prokaryotic type
ribosomal protein modification factors
Toce_1221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
DUF1678
Motif
Other DBs
NCBI-ProteinID:
ADL07978
UniProt:
D9S3K1
LinkDB
All DBs
Position
complement(1190859..1192184)
Genome browser
AA seq
441 aa
AA seq
DB search
MKEKIGLVSLGCDKNLVDSEYLLGALLENGYVITSDASEADIIIINTCCFINSAKQESID
TILEMAQYKTSGNCKMLIATGCLAQRYGDAILKEIPELDAVIGTGDFHKLPGLIEKLNNS
RLKIITENRSFINYDIKKRVRTSNYFSYVKIAEGCSNCCSYCAIPQIRGPYKSRPIESIK
EEVELLVSQGVKEINLVAQDTTSYGMDISGKPSLPDLLRALVDIKGEFWIRILYAYPTHI
DDELLELISSSTKIAKYLDIPLQHINDRILRLMNRPINSEQIKKLIEKIRIIVPDITIRT
TFIVGFPTESDSDFQELIDFVKIYRFDRVGAFKYSREEGTYAATLKPQVPERVKQERYDQ
LMTVQQVISKMNNEKMLGSTITVLAESYDPARKMFIGRSQKDAPGVDGTVMFQGEVRQLG
RFYRVKITEAFEYDLMGEVVE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaaaaaataggtcttgtatcgctcggatgcgataaaaacctcgtggattctgaa
tacctgctgggagcattattggaaaacggctatgtcattacgagcgatgccagtgaagcg
gatattatcataataaatacctgctgttttataaactcggcaaagcaagagtccatagac
accatccttgaaatggcccagtataaaacaagtggtaactgtaaaatgctgatcgccacc
ggttgtctggcccaacggtacggagatgccattttaaaagaaatacccgaattggatgct
gttatcggaacaggcgattttcacaaattgccgggattaattgagaagttaaataattcg
aggttaaaaattattaccgaaaacaggagctttataaattacgatattaaaaagcgggta
agaacatctaactatttttcctatgtcaagatagccgagggctgcagcaactgctgttct
tattgtgccataccgcagataaggggtccctataaaagcaggcccatagaatccataaaa
gaagaagtagagctcctcgtatcacagggagttaaagaaataaaccttgtagcccaggac
accacgagttacggcatggatatatcgggaaaaccttcgcttccggacctgctaagggct
ctcgtggacatcaaaggcgaattttggatcagaatactatacgcttaccctacgcatata
gacgatgagcttcttgaacttatctcctcgagcaccaaaatagcaaaatatctggacatt
cctttgcagcacataaacgacaggattttaaggcttatgaatagaccaataaattccgaa
cagataaagaagttgatcgaaaagataaggatcattgtacccgatataaccataaggacc
acttttatagtcgggtttccgaccgagtcggactcggattttcaagagctcatcgatttt
gtaaaaatataccgttttgaccgggtgggagctttcaagtattcccgagaagaaggtacg
tatgcggctacgctgaagccccaggtgcccgaaagagttaagcaagagaggtacgaccag
ctcatgacagtccagcaggtcatttcaaagatgaacaatgagaaaatgctcgggtcgacg
ataaccgtgctggccgaaagttacgatccggcaagaaagatgttcattggccgttcacaa
aaagatgccccgggtgtcgacggcaccgtaatgttccagggagaggtacgccagcttggc
cggttctacagggtaaaaattaccgaagctttcgaatacgaccttatgggagaagttgta
gagtaa
DBGET
integrated database retrieval system
