Thermosediminibacter oceani: Toce_1235
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Entry
Toce_1235 CDS
T01289
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00920
Sulfur metabolism
toc01100
Metabolic pathways
toc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Toce_1235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_1235
Enzymes [BR:
toc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Toce_1235
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Toce_1235
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Toce_1235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
MOZART1
DUF5363
Motif
Other DBs
NCBI-ProteinID:
ADL07991
UniProt:
D9S3L4
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All DBs
Position
complement(1205901..1206872)
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AA seq
323 aa
AA seq
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MDFSMFKNLLTKYDSFIITSHVKPDGDALGSVLALTMALKKYGKKVLPIINDEVPKKYRF
LPRCGDVRPFIPEVDKAEVMICLDSGDPERLEFKRDLRDICQLVVNIDHHRTNSMYGDMN
LVDDSYSSVGEMVYFLLKALDISIDYDIAVCLYTSIITDTGSVKYSNTTPSCLRILAELV
ELGVKPEVISREVFEKKSLESVMLLKEVLGTLRVCEDGKLAYMTVTKNMMKTTGAKEEDI
DGFINYAREIEGVEVAIIFKEQENLKVKVGLRANEWVDVSKIAEEFGGGGHARAAGCTIE
GPMHKVQELVLASIKKYLKEGFR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcgatgtttaaaaacctgctaactaaatacgattcctttataatcacctcc
catgtaaagccagatggagatgccctcggttcggttctggctcttaccatggcactgaaa
aaatatggaaagaaagtgttgccaattataaacgatgaagttccaaaaaaatacagattt
ttgccacggtgtggggatgtgcgcccctttatcccggaggtggataaggcagaagtaatg
atctgtctggactcaggcgatccagaaaggcttgaatttaaaagagacctccgggatata
tgccagcttgttgtcaatatagaccatcacaggaccaattctatgtacggtgacatgaat
ctggtagatgacagctattcttctgtaggcgagatggtatactttctgttgaaagccctt
gatataagcatcgactacgatattgctgtttgcctttacacttccattattaccgatacc
ggttccgtaaaatattccaatacaacaccatcttgccttaggatacttgccgaattagtg
gaacttggtgtcaaacctgaggtcattagcagagaagtttttgaaaagaaaagccttgaa
tccgttatgctgttaaaagaagtcttggggaccttaagggtttgcgaagacggtaaatta
gcctacatgactgttacaaagaacatgatgaaaacaacaggagcaaaagaagaggatatt
gatggttttataaattacgctagggaaatagagggtgttgaagtcgcgataattttcaag
gaacaggaaaatttgaaagtaaaagtaggacttagggccaacgagtgggtagacgttagt
aaaatagctgaagaattcggcggcggaggccatgccagagctgccggttgtactatagaa
ggcccgatgcataaagtgcaggaattggtcttggcatcgatcaaaaaatatcttaaagag
ggatttcggtga
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