Thermosediminibacter oceani: Toce_1339
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Entry
Toce_1339 CDS
T01289
Name
(GenBank) penicillin-binding protein transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00550
Peptidoglycan biosynthesis
toc01100
Metabolic pathways
toc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Toce_1339
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Toce_1339
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Toce_1339
Enzymes [BR:
toc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Toce_1339
Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Toce_1339
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Beta-lactamase2
Mltc_N
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ADL08094
UniProt:
D9RXM0
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Position
complement(1295035..1296639)
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AA seq
534 aa
AA seq
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MIFVGKGTRLDYFFAIVFFLIILMIIRLFDIQVLSHTYLYRRALSQWQGSSREEIRGGVF
DRDGRSLLDSQKVNYALISPRWLKESEIEYLKKNNILSFEDPYKPQSVRLSPENIAVIKK
LLGRTPGVFVYQKEKRYGQNALATHVVGYKGKAGIEKTFDKFLNGGRIKTGIIYDGFGQP
IPGASKENLFTEKWGVWLTIDREIQAAVEEVMDTEIQRGAVVVLDAKTGEILAMASRPNY
KQSDLDAYLNQKDAPLINRAVEAYIPGSIFKIVVLAAALEEKVTDLDEEFHCSGAIRVGG
NVIKCYSHEKGGHGRLTLKDALAYSCNSVFIELGMRLGKERVLEYAEKFGLGERVLSDLS
EEKTGFIPASRDVYREDLGNLSIGQGKLQVTPLQAAQMLLIIANDGIKIKPYLVKKVVDS
TGSTVTADTPATRFSERVISKDTARKVKEALRAVTQYGTGMLAAPSKVHVEVAGKTGTAE
LGDGNNHAWFVGYYPAEDPRYIVTVFVEKGQSGPFKAAPIFGKIVEKIYYLKGR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttgtgggcaaaggtacaaggctggattactttttcgccatcgtatttttttta
attatcttaatgattatacgtcttttcgacatccaggttctgtcccatacttatctttac
aggcgagcccttagtcagtggcaaggctcttcccgggaggaaatcagaggaggggttttt
gatagagacggtcggtcccttctggattcgcaaaaagtaaattacgccttgatttcgccg
cgctggttaaaagaaagcgaaattgaatatttgaaaaaaaataatatactttcatttgaa
gacccttataagccgcaaagcgtaagattatccccggaaaatatagcagttataaaaaaa
ctgctcggcagaactccgggggttttcgtttaccagaaggaaaagcgctacggtcagaat
gcacttgcaacccatgtagtaggctataaggggaaggccggaatcgagaaaaccttcgac
aaatttctgaacggaggtaggataaaaacgggtataatatacgacggttttggacagccg
atacccggggcttcaaaggaaaatctatttaccgaaaaatggggcgtatggctgacgatt
gatagggaaatacaggcagctgtagaagaggttatggacacggaaattcaaagaggagcg
gttgtagtactggacgctaaaacgggagagatactggcaatggcaagcagacccaattat
aagcagagcgaccttgatgcttaccttaatcaaaaggatgcgcccctgataaaccgtgca
gtagaagcatatataccgggttcaatttttaaaatcgttgttctcgctgcagctctcgaa
gaaaaagtcaccgatcttgatgaggaatttcactgttccggggctatcagggttgggggt
aatgttatcaagtgctatagtcacgaaaagggtggacatggtcggttaacgcttaaagat
gccttggcatattcgtgtaattcggtatttatagagctcggcatgagattgggaaaagaa
agggttttagagtatgccgaaaaattcggcttaggagagagagtattaagtgatcttagc
gaagaaaagacagggtttattcctgcttcccgtgacgtctaccgggaagatttaggtaat
ctgtcaataggacagggaaaacttcaggttacgccattgcaagctgctcaaatgctgttg
ataatagcgaatgacgggataaaaataaaaccttatttagtgaaaaaagtggtcgattcc
acgggttcaaccgtaacggctgatactccggcgacccgcttttcggaaagagtgatatct
aaagataccgccagaaaagtgaaggaagctctgagagctgtaacccaatacggaacaggg
atgttagcggcgccatcgaaggtgcatgtggaggtggcgggcaagaccggaaccgctgaa
ctcggagacgggaacaatcacgcatggtttgtggggtattatcccgcggaagatccgcgt
tacatcgttaccgtttttgtagaaaaagggcagtcgggcccctttaaggcagctccgatt
ttcggaaaaatagtcgaaaaaatttattaccttaagggtaggtaa
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