Thermosediminibacter oceani: Toce_1392
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Entry
Toce_1392 CDS
T01289
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
toc
Thermosediminibacter oceani
Pathway
toc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Toce_1392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_1392
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Toce_1392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
CCDC93_CC
MutS_III
Exonuc_VII_L
AAA_22
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
ADL08147
UniProt:
D9RXS3
LinkDB
All DBs
Position
complement(1355376..1357748)
Genome browser
AA seq
790 aa
AA seq
DB search
MNERAQKILEFDKVKRILSRYAVSDVAKGRLLELKPAADEQLIKSMQRETSEGVTILRSG
INIPLNELPDIRTSLKRATMGAVLTTGELLSIASVMKTSRLVKNTWSEKGIAECRIIGSI
IEEIHIFSSLEDKIHKAIISENEIADGASPRLSAIRKEKRILFQRAKEKLELYISSPQYQ
KFLQEPIITIRNSRYVIPVKQEFRSSIPGVIHDQSASGATLYLEPMPVLQINNELRRLEI
EEQKEMEQILREFSEKIAENREYLEVTFEGLVRLDFILAKAKYSMDIKGVEPGLNSRGYI
NIRKGRHPLLRGEVVPIDIYLGDEFTVLVITGPNTGGKTVSLKTVGLFALMAQAGLHLPA
EEGTELSVFNEVFADIGDEQSIEQSLSTFSSHMKNIKDIVDKADSRSLVLLDELGAGTDP
TEGAALAMAILDYFCEKGTRVVATTHYSELKAFAYSMERMENASVEFDVETLSPTYRLTI
GIPGKSNAFEIAKRLGLKREIIELARSFLNRENIQLEDLLKGLEQERERAKREKEEIQEL
KKQYMMRLKELEDEKEKLRNREEKILAKAREKARSIIEKVNKEAEKILERLKEVEAQDTR
QVRDRIIEEVRRRLKKASDDYSPKEPLIKKAGAKVVAGPINPGDKVRVESLNQEGYIVSV
DEREKTAQVQIGIMKVNLPLSSLVKIQEEEDKADSGNVKYSSLAMEKTREISREIDLRGL
TLDEALLKVDKYLDDASLAGLPSVVIIHGKGTGILRKGIQDMLKTRKDIKSFRPGNMNEG
GLGVTVVEFR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacgggctcaaaaaattttggagtttgacaaggtaaaacggatattgagccga
tacgccgtatccgatgtagcgaaaggtcgcctcctggagttgaaacctgccgccgatgaa
cagctgataaagagcatgcagcgggagaccagcgagggcgtcactatcctgaggtcgggg
attaatatacccttaaacgaactgcccgatatacgtacttctttgaaaagagcaaccatg
ggagctgtgctcacgaccggggaactgctttcaatagcatcggttatgaaaacttcccgc
cttgtaaagaatacctggtctgaaaaggggattgcggagtgcaggattataggcagcata
atagaggagattcacattttttcgtcccttgaagataagatccataaagccataataagc
gaaaatgaaatagccgacggggcaagccctagattgtcggccataaggaaagagaaaagg
attctgttccagagggcgaaggaaaagctggaattatatataagttcgcctcagtatcaa
aaatttcttcaggaaccgataattactattaggaacagtaggtatgtaatccccgtaaag
caggaattcagatccagtattccgggagtgatacacgaccagtcggcgagcggggccacg
ctttacctggagcccatgcccgtccttcagatcaacaacgagctgagaaggttagaaatt
gaggaacaaaaagaaatggagcagatattaagggagttttcagaaaagatcgccgaaaac
agagaatacctggaagtgacctttgagggacttgtccgcctggattttattctggcaaag
gccaaatacagcatggatattaaaggggttgagcccggcttaaattcgagaggttatatt
aatataagaaagggcagacaccctttattgagaggcgaagtggtccccatcgatatttat
ctgggagacgagttcacagtgttagttataaccggtcctaataccggcggaaaaaccgtc
tccctgaaaaccgtaggtcttttcgcccttatggcgcaggccggcctgcacctgcccgcc
gaagaaggcactgaactttccgtgttcaatgaagtatttgccgatataggggatgaacag
agcatagaacagtctctcagcactttctcatcccacatgaaaaacataaaggacattgtc
gataaagccgactcgaggagcttggtgttgctggatgaactaggcgcgggcaccgatccc
accgaaggcgcagccctcgctatggccatattggattacttttgcgaaaagggaactcgg
gtagtggcgacgacccattacagtgaacttaaagcttttgcctattccatggagagaatg
gaaaacgccagcgtggagttcgatgtagaaacgctgagtccgacctacaggctaacgata
ggcattccgggtaagagcaacgcttttgaaatagctaaaaggctcggattaaaaagagaa
ataatagaacttgccagaagtttcttgaacagagaaaacatccagttggaggacctgctc
aaaggccttgaacaggaaagagaaagggctaaacgggagaaagaggaaattcaggaacta
aagaagcagtacatgatgaggttgaaggagctggaggatgaaaaggaaaagttaagaaac
cgggaggaaaaaatactggcaaaagcccgggaaaaagcaaggagtattatcgaaaaggtc
aataaagaagctgaaaagatattggaaaggttaaaagaggtagaggctcaggatacaagg
caggttagggaccgaattatcgaggaggtaagaaggcggctaaagaaagcgtcagacgat
tattccccaaaggaacccttaataaaaaaagccggtgctaaagttgtagctggtccaata
aatcctggagataaagtccgggtggaaagcttaaatcaggaagggtatatagtgtcggtt
gacgaaagggaaaaaacggcacaggtacagataggaatcatgaaggtgaatttaccgtta
tccagcttggtgaaaatacaagaggaagaggataaagccgatagcggtaacgtgaagtat
tcatccttagccatggagaaaaccagagagatttcaagagaaatagacctgaggggcctt
actctggacgaggccttgttaaaagtcgacaaatacctagacgatgccagccttgccggt
ttgcccagtgtggtgatcatacacggcaagggaacgggaatactccgcaaaggcatacag
gacatgctgaaaactcgaaaagacataaagtctttcaggcccggtaacatgaatgaggga
ggattaggggtcacggtggtggaattcaggtga
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