Thermosediminibacter oceani: Toce_1396
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Entry
Toce_1396 CDS
T01289
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Toce_1396
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
toc01007
]
Toce_1396
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
toc03016
]
Toce_1396
Enzymes [BR:
toc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Toce_1396
Amino acid related enzymes [BR:
toc01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Toce_1396
Transfer RNA biogenesis [BR:
toc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Toce_1396
Prokaryotic type
Toce_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADL08151
UniProt:
D9RXS7
LinkDB
All DBs
Position
complement(1362202..1364601)
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AA seq
799 aa
AA seq
DB search
MKVSLKWMREYVNYDGRPEELARRLTMSGSNAESIEYPGRDIKSVVVGEIIKIGKHPDSD
KLLVTKVNVGHRVLQIVTGARNIKEGDRVAVALPGAVIEGGIEIKVQSIKGLESQGMLCS
AKELGLDDSGLPEDVKNGLLILPEDAPVGNDIKDYIGLEDVVIDFEITPNRPDCLSIVGM
AREAAATFNIPLNPLSINLKEESVEKVPDIVNVTVEAGDLCKRYIARIIKDVKIKPSPLW
MQRRLQVCGIRPINNIVDITNYVMLELGQPLHAFDYDKLAGCSIIVRRGKKGETITTLDG
KLREICEDTLVIADKKGPVALAGIMGGAETEVTSETRTVLLESANFWGPNIRRTSRKMGL
RTEASQRFEKGLDPNLAAVAAERACELIERLGAGRVLKGCVDVYPEPVLPRKLPLRVDRI
NALLGTEISRHQMIDILERLGIKSLEESDQTFVVIPTFRADITQEADLAEEIARIYGYDN
LPSTLPGSIATCGKLNRNQKLTNEIKQTLMGCGFSEIYTYSFISPSAFDALRAPEDHEVR
RAVKIINPLGEEHSIMRTTLLPGILEVIKLNLNQKRESIRIFELGTVYIPRQIPLKELPV
EKKKLGVAICDENLDFYYLKGVIETLLLKLKIRGAVFYPGEHFSLHPGRTATISIDGEIA
GFIGEVHPDVMENYGMEDKRAYVAELDLDLLLDRSQTEVKFKPLPRFPAADRDVAIVVEE
GVTAGSIMEAIKEAGGEVLENVELFDVYRGNQIPEGYKSLAFSLTYRAKDRTLTDEEINR
LHGNITECILKKFNGRLRE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtatctctaaaatggatgagagaatatgtaaattacgacggcaggccggaggaa
ctggcgagaaggctcaccatgtcgggctcaaatgcagaaagtatagaatatccggggcgt
gacataaaaagcgtggtggtcggcgagataataaaaatcggaaagcaccccgattccgat
aagttgcttgtcacaaaggttaatgtcgggcatcgggtgcttcagatagttacgggagcc
cggaacatcaaagaaggcgatagggttgcggttgccctgccgggagcagttattgaaggc
ggcatagagatcaaagttcaaagtataaaagggctggaatcgcagggaatgctatgttcc
gcgaaggaactggggcttgatgacagcggattgcctgaagacgtgaaaaacggacttttg
atcctgcccgaggatgcgccggtaggaaatgatattaaggattacatagggctggaggac
gtcgttatagactttgaaataactcccaacaggcccgattgtttgagcatcgtcggaatg
gcaagagaagccgccgctaccttcaatattcctttaaatccgctttcaattaatctgaaa
gaagaatcggtcgaaaaggttccagacatagtaaacgtgacggtggaagccggggacctg
tgcaaacgttatatcgcgaggataataaaagatgtgaaaataaagccctcgcctctctgg
atgcagaggaggttgcaggtatgcggaatacgcccgataaacaacatcgtggatattacc
aattatgtgatgctggaactgggtcagccccttcacgcttttgactatgacaaactggcg
ggttgttcaataatagtgcgcaggggcaaaaagggcgagacgataaccaccctggacggc
aagctgagggaaatttgcgaagacacactggtaatagccgataaaaaaggccctgtagcc
ttagcggggattatggggggagcggaaaccgaagttacgtcggaaaccaggaccgtactc
ctggaatcagccaatttctgggggcctaacatccggcggacatcaagaaaaatgggcttg
aggaccgaagcatcccagcgctttgagaaaggtcttgacccgaatctggcagcggtagct
gctgaaagagcctgcgagctgattgaaaggctgggggccggtagggtattgaaagggtgt
gtcgacgtatatccggaacccgtgcttcccagaaaactacctctgcgggttgacaggata
aatgcccttttgggcaccgagatttcaagacaccaaatgatcgacatactggaacggctg
ggaattaaatctcttgaagaatccgatcaaacctttgtcgtcattccgacgttccgcgct
gacattacccaggaggcggatctggcggaggaaatcgccagaatttacggatacgacaac
cttccttcgactctgccgggtagcatagctacctgcggtaaattgaaccgcaatcagaaa
cttacgaacgagataaagcaaaccttgatgggttgcggcttttcggagatttacacctat
tcttttataagccctagcgctttcgacgctttgagagcaccggaagaccatgaagtccgc
agggctgtcaaaataataaaccctcttggcgaggagcacagcataatgagaaccacactg
ctgcccggcattctggaagtgataaagcttaatcttaaccagaaacgggaaagcatcagg
atttttgaattaggaactgtctacattcccaggcaaatacctttaaaggaattgcctgtt
gagaagaaaaagctgggtgtggctatatgcgatgagaatttggatttttactacctgaaa
ggtgtaattgaaactcttttgcttaaattaaaaatacgcggagctgttttttatcccggc
gagcatttttccctgcatccgggaaggactgcgacaatctccatcgacggcgaaatcgca
ggttttataggagaggttcaccccgacgtaatggaaaattacggtatggaagacaagcgg
gcttatgtagcggagctggatctggaccttttactcgatagatcccaaacggaggttaaa
ttcaaaccgttgccaagattcccggcagcggacagggatgtggctatagttgtagaagaa
ggcgtaaccgccggtagcataatggaagcaataaaggaggccggcggagaagtgctggaa
aatgttgagctgtttgacgtatacagaggaaatcagataccggaaggatataagagcctt
gctttttctttgacgtacagggcaaaggacaggacgctgactgatgaagaaataaaccgg
ttgcacggcaatattacggaatgcatcttgaagaaattcaacggccgcctgagagagtag
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