Thermosediminibacter oceani: Toce_1492
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Entry
Toce_1492 CDS
T01289
Name
(GenBank) PAS modulated sigma54 specific transcriptional regulator, Fis family
KO
K06714
arginine utilization regulatory protein
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
toc03000
]
Toce_1492
Transcription factors [BR:
toc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Toce_1492
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
HTH_8
PAS
HTH_30
AAA_5
AAA
PAS_9
AAA_3
Mg_chelatase
PAS_10
AAA_2
PAS_7
AAA_16
HTH_1
DUF7690
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ADL08241
UniProt:
D9RY17
LinkDB
All DBs
Position
complement(1462280..1463698)
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AA seq
472 aa
AA seq
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MSAEFLNEFYDEILNSLDVGIHIVDREGNTVFYNAAMGRLERLDPDAVIGKKLLEVFPSL
NRETSTLFRVLKTGEAIVDRVQTYFNYRGQRITTINTTLPLKKGNKIMGAVEIAKDITKL
REMAEKVVFLQDSTKIKVSREMPHPFTRFTFEDIIGESPAITKAIHMARKASMTSSSVLI
FGETGTGKELFAHSIHNASPRKGRPFIAQNCAALPESLLEGILFGTVKGSFTGAVDRPGL
FEQAHGGTLLLDEINSMGINLQAKLLRVLQEGCVRRIGDTRTIPVNVRIIATTNEDPLQA
VEKGILRKDLFFRLGVVCVKIPPLRERKEDIILLTRHFIDKFNKKLNRNVIDISPAVKRI
FMEYNWPGNVRELENVIEGSMNMIGDESLIEEEHLPFYITDYLNRKSEKTGADLLAFMEL
ENYSLDEILSKIEKEIIKRTIKECNGNVTKAADRLKVKRQTLQYRMRRLNME
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaatttctgaacgaattttacgatgagatactcaacagcctggatgttggt
atccatatagtagaccgcgagggaaatacggttttttataatgcggctatgggcaggctg
gagaggcttgaccccgacgccgtcataggcaaaaaactgctggaggtgtttccatcactt
aaccgtgagaccagcaccctattcagggtgctgaaaacgggagaagctattgtcgatcgc
gtgcaaacctattttaactacaggggacagcggataaccaccatcaacaccacgctgccg
ctgaagaaaggcaataaaataatgggagccgtggaaatcgccaaagatattacaaaactc
agggaaatggcagaaaaggtggtatttttacaggattctacaaaaataaaagtttcacgg
gaaatgccccacccgtttaccaggtttacttttgaagacataatcggcgaaagtccggcg
attacaaaagcgatccacatggcgaggaaagcctctatgacctcttcttcggtgctaata
ttcggagaaacgggtacaggaaaagagttgttcgcacatagcatacacaacgcaagtccg
cgaaaaggaaggccttttatcgcacagaactgtgcagcactcccagaaagccttcttgag
gggatcctgttcggtacggtaaaagggagctttaccggcgcggtggacagacccgggctt
tttgagcaggcccacggaggtaccctgcttttagatgagataaattccatgggcataaac
cttcaggcaaaactcttgagagtactgcaggaaggttgtgtaaggaggatcggcgatacc
aggaccataccggtaaacgtaaggataatcgctacgaccaatgaggatcctctgcaggct
gtagaaaagggaatattaaggaaagacctcttcttccggctgggagtcgtctgcgtgaaa
attccgcccctgagggaaaggaaagaggacataatcctcctcacacgccactttatagat
aagttcaacaaaaaactgaacaggaatgtgatcgacatttccccggcggttaaacgcatt
tttatggaatacaactggcccggcaacgtgagggaactggagaacgtcattgagggttct
atgaatatgataggagatgagtctttgatagaagaagaacacctgccgttttacattacc
gattatttgaacagaaagtcggaaaaaaccggagcggatcttcttgcctttatggaatta
gaaaattattcccttgacgagatacttagtaagattgaaaaagaaatcattaaaaggacc
ataaaagaatgcaacggcaacgtgacaaaggcggcagacagattgaaagttaagcgacag
accctccagtacaggatgagaaggctgaatatggaataa
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