Thermosediminibacter oceani: Toce_1512
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Entry
Toce_1512 CDS
T01289
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Toce_1512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_1512
Enzymes [BR:
toc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Toce_1512
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Toce_1512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADL08260
UniProt:
D9RY36
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All DBs
Position
complement(1483419..1484255)
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AA seq
278 aa
AA seq
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MLFGAHISISKGYENAVKEALSIGANTLQFFTRNPRGGAAKALDENDIKKSFELREKENF
GPMVAHAPYTVNMAANKNETADFTRRVLREDLDRLEKVGAPYLVIHPGSHLGDGVEAGIE
RIAAVLKEVVTGRERVMVLLETMAGSGSEVGYTFEQLYDIMDKTGIPHAFGVCIDTCHLY
GAGYDVKDRLDEVLAEFDRVLGLDKIKAVHLNDSKFGLASRKDRHANLGQGQLGLEAIKR
VITHPALKGRAFLLETPGGMENYKKEIAILKEMSKENG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgctatttggcgcccatatatcgatttcaaagggttacgaaaacgcggtgaaagaagcc
ctttctatcggggccaacacccttcagtttttcacccggaatccgcggggaggcgccgcc
aaggccctggacgaaaacgatattaaaaaatcttttgagttgcgggagaaggaaaacttc
gggcccatggtggcccacgcgccctataccgtgaacatggcggctaataaaaatgagacg
gcggactttacgaggagggtgctcagggaagacctggatagactggaaaaggtgggggct
ccttacctcgtgatacatccgggtagccacctgggcgacggagtggaagcgggtattgaa
agaatcgcagcggtgttaaaagaggtcgtcacaggcagggaaagggtgatggtacttttg
gagaccatggccggttcgggcagcgaagtgggatatacctttgagcagctgtacgatata
atggataaaaccggcattccccatgccttcggtgtgtgtatagacacctgccacctttac
ggtgcgggatatgacgttaaggaccgcctggacgaggtcctggcggagtttgaccgagtg
ctggggttagataaaattaaagccgtgcacctgaacgacagtaaatttggcctggccagc
cgtaaggaccggcatgccaacctgggccaagggcaactcgggcttgaagccataaaaaga
gtcataactcaccccgccttaaaaggcagagcctttttgctggagacccccggtggcatg
gaaaactataaaaaagagatagcgattttaaaggaaatgagcaaagaaaatggctga
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