Thermosediminibacter oceani: Toce_1653
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Entry
Toce_1653 CDS
T01289
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc03030
DNA replication
toc03410
Base excision repair
toc03420
Nucleotide excision repair
toc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Toce_1653
03410 Base excision repair
Toce_1653
03420 Nucleotide excision repair
Toce_1653
03440 Homologous recombination
Toce_1653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
toc03032
]
Toce_1653
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_1653
Enzymes [BR:
toc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Toce_1653
DNA replication proteins [BR:
toc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Toce_1653
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Toce_1653
NER (nucleotide excision repair)
GGR (global genome repair) factors
Toce_1653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADL08390
UniProt:
D9RYG6
LinkDB
All DBs
Position
complement(1631697..1634291)
Genome browser
AA seq
864 aa
AA seq
DB search
MKKIMLIDGNSLIHRAFHALPPLMTSKGVHTNAVYGFMNMLMRILKEQRPDYIAVAFDKK
SPTFRHQEFIEYKANRVRTPEELVGQFDVLKQILKAMNIRYIEIDGYEADDILGSLSKKA
EEAGIFTLIVTGDKDTLQLVSPMVHVMLTRKGISEMEIYDPDKMAERFGIPPQAIPDMKG
LMGDSSDNIPGIPGVGEKTALKLLQEYGSLENILENAEKLKGKLRENILKYGEQARVSKR
LATIVRDVELDVDLEEIALTEPDYAELLKIFRELEFYTLINKLPRPQEKEEHPEKLSCTV
IDYSGFGRMMERVRAAGVLAVELKTDGRNPMDAHLIGIGFSPSRGEGFYVPAEVLEKSPE
VKSDLKAVLADPGITKIIHDGKYARTVLAKIGMDFVYNFDTMLAAYLLDPSKPRYDLESV
VFDNLGVELKGTEDPGRRVAYLIPLKEIMSEKLKSCAMEELFFGVEMPLSFVLSDMEMTG
IKVDPEKLESLSREFGEKLEELTGEIYRLAGVEFNINSPKQLGEVLFEKLNLPVIKKKKS
GYSTDAEVLEKLKNAHPVVEKILEYRFLMKMKSTYADGLLALVDKSTYRIHSNFNQTITA
TGRISSTEPNLQNIPVKTDIGRKIRGVFVAESPEHVLLSGDYSQIELRVLAHLSGDEGLI
EAFIKGEDIHTRTASEVFGVPPEQVTPLLRDRAKAVNFGIIYGISDYGLAQNLGISTAEA
REYIENYLNRYPKVRDYIRETIRNARMSGYVTTILNRRRYIPEINSRNYNLRSFAERVAM
NTPIQGSAADIIKVAMVKITNHFREYGLKAKMLIQVHDELIFDVPKSELEVVKNIVKDDM
ENAIPLKVPLVVDFKEGYTWEEIS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaataatgttgattgatggaaacagcctgatccacagggcctttcatgccttg
ccgccgctgatgacatccaagggagtgcataccaacgctgtatacggcttcatgaacatg
ctgatgcggattctgaaggaacagcggcccgactacatagcggtggcctttgataaaaag
tcacccacattcaggcaccaggaatttattgagtataaggccaacagggtcaggacaccc
gaagagctggtgggccaattcgacgttttaaaacaaatactaaaggcgatgaacatccga
tatatcgaaatagacggatacgaagccgatgacatactcgggagcctgtcgaaaaaagcc
gaagaagcagggatctttacgctcatcgtaacaggggataaggatacccttcagctggta
tctcccatggtccacgtgatgcttaccaggaagggtatatcggaaatggagatttacgat
cccgataagatggctgagcggttcggtataccaccgcaggccatccccgatatgaagggg
ctcatgggcgactcgtccgacaatatacccggcattccgggggtaggagaaaaaacggcc
ttgaaacttttgcaggaatacggctccctggaaaatatcctggaaaatgcagagaagctc
aaggggaagttacgggaaaatatattaaaatacggtgagcaggctcgagtcagcaagcgc
ctggcgaccatcgtcagggatgtggagctggacgtcgacctggaagagattgctttaacc
gaacccgattacgcagagctcctaaaaattttcagggagctggagttttacactctcata
aataaactgccccgcccgcaagagaaagaagaacatcctgagaagctgtcgtgcaccgta
atcgactacagcggtttcggccggatgatggaaagggtaagagctgcgggagttctggcc
gtggaactgaaaaccgacggtagaaatcccatggatgcccaccttataggcataggcttt
tcgccttcccgcggggaagggttttacgtaccggcagaagtactggaaaaaagcccggag
gtgaaatccgatctaaaagccgtactggccgacccggggattactaagataatccacgac
ggaaagtacgcgaggacggtacttgctaaaataggaatggattttgtatacaattttgat
accatgctggcagcttacctgctggacccctcaaagcccagatatgacctggagagcgta
gtcttcgataacctgggcgtggaattgaaaggcaccgaagatcccggcaggagggtagcg
tacctcatacctttgaaggagataatgagcgaaaaacttaaaagctgcgcaatggaagag
ctctttttcggagttgagatgccgctgagcttcgtgctgtctgatatggagatgacgggg
ataaaagtggaccccgaaaagctcgaatctctatcaagggagttcggggaaaaactggag
gaactaaccggagaaatttaccggcttgcgggggtggagtttaacataaactcgccgaaa
caactgggggaagtgctttttgaaaagctaaacctgccggtcataaagaaaaaaaagagc
ggttattccaccgatgccgaagtcctggaaaaactgaaaaacgcccatccggtcgtggag
aagattctggaataccggttcttgatgaaaatgaagtcaacctatgccgatgggctgttg
gcccttgttgacaaaagcacttatcgtattcacagcaatttcaatcagactataaccgcc
accggccgtatcagcagtaccgagccgaacctgcagaacatacccgtcaagaccgatata
ggcaggaagataaggggggtgtttgtggcggaaagtcccgagcatgtcttgctgtccggg
gattattcccagatagagctgagggtcctggcacatttatcgggagatgaggggcttatc
gaggctttcataaaaggggaggatatccataccaggaccgccagcgaggtcttcggggtt
cctcccgaacaggttacccctcttttaagggatagagcaaaagccgtaaattttggtata
atctatggtataagcgattacggccttgcccagaacctgggcatatccaccgcggaagcc
cgggagtatatcgaaaattacttaaacaggtatccgaaggtaagggattatatccgggag
accatcaggaatgccaggatgagcgggtatgtgaccaccatcctcaaccgcaggcgctac
attccggaaattaacagcaggaactacaacctcaggtcctttgccgagagggtggcgatg
aacacccccattcaggggagtgctgcagatataataaaggttgccatggtgaaaattacc
aaccactttcgtgagtatggactcaaggccaaaatgctaattcaggttcacgacgagctg
atcttcgacgttccgaagtccgagcttgaagtcgtgaaaaatatcgttaaagatgatatg
gaaaacgccattccgctgaaggtcccgctggtggtcgattttaaggagggctatacctgg
gaagaaataagctga
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