Thermosediminibacter oceani: Toce_1928
Help
Entry
Toce_1928 CDS
T01289
Name
(GenBank) Type II secretion system F domain protein
KO
K02653
type IV pilus assembly protein PilC
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
toc02044
]
Toce_1928
02035 Bacterial motility proteins [BR:
toc02035
]
Toce_1928
Secretion system [BR:
toc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Toce_1928
Bacterial motility proteins [BR:
toc02035
]
Pilus system
Pilus assembly proteins
Toce_1928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
ORF11CD3
Phage_holin_3_6
TcpE
Motif
Other DBs
NCBI-ProteinID:
ADL08657
UniProt:
D9RZA3
LinkDB
All DBs
Position
complement(1934556..1935770)
Genome browser
AA seq
404 aa
AA seq
DB search
MAIYSYRARDAFGQPVVGTVEAENEAAVVRLLRDKGLFIVEVRPGRERFAINSGRLLRRV
GKQDLAVFCRQLATMLGAGLPIVPALQILAMQAENKILRRNIEEIVRSLEGGETFHEALA
RLQVFPPIMVHAIEAAELGGSLDEALEELAAHLEREHELQEKVKSALTYPALVVSVALAV
LIVLLVFVLPAFQNMLNALGVPLPLPTRIVMGVSRALRRGWPILIFAAGILAYVAYGVLK
TDNARYRLDGILLKLPVFGPLHKKAVLSRFSRSLGTLLRSGVPILQAMDVVRRTVGNRVV
AEAIARAQESVRDGKGIADPLKESGIFPPMIIGMIAVGEETGALDFLLAKISELCDREVK
EAVSRLSALIEPLLIAMLGGAVGFIVISILLPYFQILGNIGNIG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttacagttatcgtgcgcgcgacgcttttggtcaaccggtggtcggtactgta
gaagcggaaaatgaggcggctgtcgtccggcttttaagggataagggtttatttatcgtg
gaagttcgccccgggcgggaacggtttgcgataaattcaggacgacttttacgccgcgtt
ggaaaacaggatcttgcggttttctgccggcaactggccaccatgctcggagcgggactt
ccgatcgtcccggctctccaaatcctggccatgcaggctgaaaataaaatattgcgcagg
aacattgaagagattgtgagaagccttgaaggaggtgagacttttcacgaagcgctggcc
cggttgcaggtttttcctccgataatggtgcatgcaatagaggcggctgagctgggaggg
tccctcgatgaggccctcgaggagttggctgcccacctggaacgggagcatgagcttcag
gagaaggtcaagtccgcccttacgtatccggctttagtcgtatcggtggctttggcggtt
ttgatcgttttgctggtcttcgttctcccggcttttcaaaacatgctgaacgccttgggg
gtgccattgcccctcccgacccggattgtgatgggcgtaagcagagctctccggcgggga
tggcctatcctgatctttgcggcaggtattctggcttatgtggcttacggggtcctcaaa
acagataacgccagataccgcctggacggtattttgctgaaactgccggtatttggcccg
ctccacaagaaggcggtcctttcccgcttcagccgtagcctgggcacgctccttagaagc
ggggttccgattctccaggctatggatgtagtacggcgaacggtgggaaaccgggtagta
gctgaagccatagctagggcacaggaaagtgtcagggatggtaagggcattgcggacccg
ctgaaggagagcggtattttccctccgatgatcatcggaatgatcgccgtaggcgaagaa
accggtgcccttgatttccttctggcgaaaatcagcgaattgtgcgaccgtgaagtgaaa
gaagccgtcagccgcctgtctgctctgatagagcctttattgatcgccatgctgggcggt
gcggtgggatttattgtgatttccatattgctgccctacttccagatacttgggaatata
ggaaatataggataa
DBGET
integrated database retrieval system
