Thermosediminibacter oceani: Toce_2000
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Entry
Toce_2000 CDS
T01289
Name
(GenBank) PAS modulated sigma54 specific transcriptional regulator, Fis family
KO
K06714
arginine utilization regulatory protein
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
toc03000
]
Toce_2000
Transcription factors [BR:
toc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Toce_2000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_4
PAS
PAS_9
AAA_5
HTH_30
PAS_8
AAA
Mg_chelatase
AAA_16
AAA_2
HTH_50
AAA_3
GAF_2
PAS_GdpP
HTH_28
GAF_PdtaS
AAA_7
Kinesin
MCM
BrxC_BrxD
UBA
HTH_1
GAF
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADL08721
UniProt:
D9RZU4
LinkDB
All DBs
Position
2014870..2016288
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AA seq
472 aa
AA seq
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MNEVEKRLKEILSYKTIRKIFDALDEGIIIVDRDYNIIFYNNTLTRFEGLESKNVIGKKL
LEVFPSLTPEESTIYQVIETGRPIFNRYQQYLNYKGMEIRTLNTTIPIVENGQVLGALEI
SRDVSEVYALSQKVLELQQKLIGKKPRSINVGLKYSFDSIVGSSKKIREIVEVLKKVAGT
TSSVLIYGETGTGKELFAQSIHSESPRKNRPFIAQNCAALPETLLESLLFGTTKGSFTGA
EDKPGLFEQADGGTLLLDEINCMGLSLQSKLLRVLQEGVVRRIGATFDIPVDVRIIATTN
EKPSELLKSGRLRSDLFYRLSVIYVEIPPLRERPEDIEELVSFFIKKYNAKFGKDVKGVD
RQVLNIFREYPWPGNVRELEHVIEGVMNYVDGGYILTGDLKYLSFGSFRDYIEKKPDPAI
GVKSRVDEYEKDLILNALRSTGGNITRAAQKLGIKRQSLQYRMKKYGITKEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggtcgagaagcgtttgaaggagattctctcctacaaaaccataaggaagatt
ttcgatgccctggacgaaggcatcatcatcgtcgaccgggactacaacatcattttctac
aacaatacactgacccgcttcgaaggcctggaatccaaaaacgtcatagggaaaaagctt
ctcgaagtatttccatccctgactcccgaagaaagtacaatttatcaggttatcgagacc
ggacggcctatattcaaccgctaccagcaatacctgaactacaaaggcatggagatcagg
acactaaacaccacgatacccatcgtcgaaaacgggcaggtactgggagcgctggagatt
tccagggatgtgtcggaggtatatgccctttcccagaaggtgctggaactccagcaaaaa
ctcataggcaagaagccccggtccataaacgtagggctgaaatactccttcgacagcata
gttggcagcagtaaaaagataagggaaatagtagaagtcctgaaaaaggtggccggaacc
acctcctcggtactgatatacggcgagaccggcaccgggaaggaacttttcgcccagagc
atacattccgaaagcccgagaaagaacaggcctttcattgcccagaactgcgccgcctta
cccgaaaccctgctggaatcgttgctcttcggcaccacaaagggcagttttaccggcgcc
gaagacaaacccggcctgttcgaacaggccgacggcggcacgctgctcctggacgaaatc
aactgcatggggctttcgctgcagagcaagcttttaagagtgctgcaggaaggggtcgtc
aggaggataggggcgaccttcgacatccccgtggacgtaaggataatagccaccaccaac
gaaaaaccatcggagcttttaaaaagcggtaggctcagaagcgaccttttctacaggctg
agcgtaatctacgtagagattccaccgctgagggaacgcccggaagacatcgaagagctt
gtaagttttttcataaaaaagtacaacgccaaattcggcaaggacgtaaaaggcgtggac
cggcaggtactgaacatattcagggaatacccctggccgggaaacgtgcgggagctggaa
cacgtgatcgagggcgtgatgaattacgtggacggtggctatatcttgacgggggacctg
aagtacctcagtttcggaagttttagggactacatagagaaaaagcccgaccctgcaata
ggcgtgaaatccagggtggacgaatacgaaaaagatttgatactcaatgctttaagaagc
accggcggcaacataaccagggccgcccaaaagctgggaataaaaaggcagtcgctgcag
taccgtatgaaaaaatacggcataacaaaagagctttaa
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