Thermosediminibacter oceani: Toce_2050
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Entry
Toce_2050 CDS
T01289
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03093
RNA polymerase sigma-I factor
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toc03021
]
Toce_2050
Transcription machinery [BR:
toc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Toce_2050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
HTH_9
TMEM120A-B
Motif
Other DBs
NCBI-ProteinID:
ADL08768
UniProt:
D9RZZ1
LinkDB
All DBs
Position
complement(2062085..2062789)
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AA seq
234 aa
AA seq
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MSHPSINERVMMIKSNKDEVNRLIEEYRPFIASVVEKYLGRRVEYGIDDELSVAMIAFDE
AVQRYDIKKGNFLAFARNVIRSRLVDYYRRERKNRETVMYIVQNQEDEEYELDISIEESI
KKHREEEISEQRRLEILEIKKELEKWGLTFSDVAKSSPKQEGTRRIYLQVIDFIMSSPEI
LDTIKQKKYLPVDKIVKATKIPRKKIERGRNYIIAAVIILSGDYRYIKEYIKWG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatccttctataaacgaaagggtcatgatgataaagagtaacaaggatgaagta
aaccggttaattgaggagtacaggcctttcattgcttcggttgtagaaaagtacctgggc
cgccgggttgaatacggaatagacgacgagctgagcgtagccatgatcgccttcgacgaa
gccgttcagagatacgacataaaaaaaggtaattttctcgcctttgccagaaacgtgata
agaagccggcttgtcgattactaccggcgggaacggaaaaacagggaaacggtaatgtac
atcgtacagaatcaggaggatgaggaatacgagctggacatcagcattgaggaatctata
aaaaaacacagggaagaagagataagcgaacaaagaaggctggaaatcctcgaaataaag
aaggaactggaaaaatgggggctaaccttttccgatgtggccaaaagttcccccaaacag
gaaggcacccgccggatttatcttcaggtaatcgacttcataatgtcgtcaccggaaata
ctggatacgataaaacagaaaaaatacctgccggtagataaaattgtaaaagcgactaaa
ataccccgaaagaagatcgagcgagggcgaaattatataatagcagcggtgattatttta
tcgggggattacagatacataaaagagtacatcaagtgggggtaa
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