Thermosediminibacter oceani: Toce_2065
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Entry
Toce_2065 CDS
T01289
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00260
Glycine, serine and threonine metabolism
toc00460
Cyanoamino acid metabolism
toc00630
Glyoxylate and dicarboxylate metabolism
toc00670
One carbon pool by folate
toc00680
Methane metabolism
toc01100
Metabolic pathways
toc01110
Biosynthesis of secondary metabolites
toc01120
Microbial metabolism in diverse environments
toc01200
Carbon metabolism
toc01230
Biosynthesis of amino acids
toc01240
Biosynthesis of cofactors
toc04981
Folate transport and metabolism
Module
toc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Toce_2065
09102 Energy metabolism
00680 Methane metabolism
Toce_2065
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Toce_2065
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Toce_2065
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Toce_2065
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Toce_2065
Enzymes [BR:
toc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Toce_2065
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
RNaseH_pPIWI_RE
Beta-prop_EIPR1
Motif
Other DBs
NCBI-ProteinID:
ADL08780
UniProt:
D9S003
LinkDB
All DBs
Position
complement(2075771..2077015)
Genome browser
AA seq
414 aa
AA seq
DB search
MEILKLVDPEIAEVIESEMKRQQNNLEMIASENFASKAVMEAQGSVLTNKYAEGYPGNRY
YGGCEFVDVVENLARERAKKLFGAEHVNVQPHSGTQANTAVYFSALNVGDKVMGMNLAHG
GHLTHGSRVNISGKYFNFIPYGVSKETGYIDYDEVEALAEEHRPRMIVAGASAYPRIIDF
SRMAEIAKKVGAYLMVDMAHIAGLVAAGLHPSPVPVSDFVTTTTHKTLRGPRGGMILCKQ
EYARSIDKAVFPGIQGGPLMHVIAAKAVCFKEAGTEEFRKYQEQVVKNAKVLAKALMERG
YNLVTGGTDNHLILVDLRNKNLTGVAAEKLLDEVGITVNKNAIPYDPEKPNVTSGIRIGT
PALTSRGMKEAEMEEIAELIDITLTHRDDEIKRAKVAKAVKALCQRFPLYANMR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagattttaaaactagtcgacccagagatcgccgaagttattgaaagcgaaatgaag
cgccagcagaacaacctggaaatgatcgcatccgaaaactttgccagtaaggcggtaatg
gaagctcaaggttcggtgctcacaaataaatacgcggagggatatcccggcaataggtat
tacggcggttgcgaatttgtggacgtagttgaaaacctggccagggagagggccaagaaa
cttttcggagcagagcatgtcaacgtccagccccattccggaacccaggccaacaccgcc
gtatatttttctgccctgaacgtgggcgataaggtaatgggcatgaacctggcccacgga
ggtcacctgactcacggcagtcgggtaaacatatccggcaaatatttcaactttatccct
tacggtgtttcgaaggagaccggatacatcgattacgatgaagtcgaggctctggccgag
gaacacaggcccaggatgattgtagcaggagccagtgcctaccccagaataattgacttt
tccaggatggccgagatagccaaaaaggtaggagcatacctcatggtagatatggcccat
atagccggcctcgtagccgcagggcttcacccgagcccggtgccggtatccgactttgtt
acaaccaccacccacaagaccctcagggggccaagaggtggcatgatcctgtgcaaacag
gaatacgcccggtctattgataaagccgtatttcccggtatccagggcggaccgctgatg
cacgtcatcgctgctaaggcggtatgcttcaaagaagccggtacggaggaattcagaaaa
taccaggaacaggtagttaaaaacgcaaaggtactggctaaagctttgatggagagaggc
tataacctggtaaccggtggtacggacaaccatctgatactggtagatctaagaaataag
aacctgacgggggtcgccgccgagaagctgctggatgaggtgggcatcactgtaaacaaa
aacgcaataccctacgaccccgaaaagcccaatgtgaccagcggcatccgcatcggcacg
ccggcgctcacgtccagaggcatgaaggaagccgagatggaggaaatagccgagctcata
gatatcacactgacccaccgggacgacgaaataaagagagccaaagtggccaaggcggta
aaggccctttgccagagatttccgctttacgcaaatatgaggtag
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