Thermosediminibacter oceani: Toce_2122
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Entry
Toce_2122 CDS
T01289
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_2122
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Toce_2122
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
RecA
DnaB_C
AAA_16
AAA_22
DUF7125
NTPase_1
Rad51
AAA
KdpD
ATPase_2
AAA_24
nSTAND3
AAA_19
TackOD1
AAA_30
AAA_14
SLFN-g3_helicase
NPHP3_N
zf-RING_10
AAA_5
Intein_splicing
divDNAB
AAA_18
DUF7129
DZR
DAP3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADL08836
UniProt:
D9S0H8
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Position
complement(2125772..2127121)
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AA seq
449 aa
AA seq
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MKSKRRFVCQQCGFESVKWMGRCPDCGSWNSFAEEQVTRSAGVSFLSEHQKPLLLSEIDY
SEEERIKTGLLELDRVLGGGIVPGSLVLVGGDPGIGKSTLMLQAAAKLGATGKIVLYVTG
EESAKQVKLRAERLGISGGHLYIVAENNLDVVEKHVRELSPQVVIIDSIQTAYLPELESA
PGSISQVREATLRLLKLSKETGTAVFIVGHVTKEGSLAGPRTLEHMVDCVLYFEGERYQS
YRVLRAVKNRFGSTNEIGIFEMQTSGLAEVDSPSKFLLSGRLGNSPGSAVVCTMEGTRPL
LVEVQALTCPTGFNLPRRQTSGIDYNRAALLIAVLEKKLGLNLAHEDVYINAAGGIKLTE
PAVDLAVITAIVSSFKNKPVRDVVIIGEVGLAGEVRSVGYIEKRVNEAAKLGFKEAIIPY
DNMRDLKNTVGIDISGVKELKDAIEAAFD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagtaaaaggcgctttgtctgccaacagtgcggctttgagtcggtcaagtggatg
ggcagatgccccgattgcggaagctggaacagctttgcggaagagcaggtaactcgaagt
gccggagtgtcatttctttctgaacaccaaaaacccctccttttaagcgaaatagattat
tcggaggaggagcggataaagacgggtcttttggagctcgacagggtgctaggtgggggt
atcgttcccggcagcctggtgctggtgggtggagacccgggtatagggaaatccacgctg
atgctgcaggcggcggcaaagctcggcgccaccgggaaaattgttctctacgtcaccggc
gaagaatcggccaaacaggtaaagctgcgagccgaaaggctggggatttccggcgggcac
ctgtacatagtagcggaaaacaatttggatgtagtggaaaagcatgtaagggagctttcg
ccccaggtggtcataatagattccatacagaccgcctaccttccagagctcgagtcagct
ccgggcagcatcagccaggtaagggaagccacccttcggcttctcaaactttccaaggaa
acgggcaccgccgtattcatagtgggacacgtcaccaaagaggggagtctcgcgggcccc
aggactttggagcacatggtcgactgcgtgctgtattttgaaggcgagagataccagtct
taccgcgtgctgagggcggtgaagaacagattcgggtcaactaacgagataggcattttc
gagatgcagacttccgggctggcggaagttgacagtccgtctaaattcctgctttcgggc
aggctcggaaattctccgggttctgcggtggtgtgcaccatggaaggtacaaggcccctg
ctggtagaagtccaggcgcttacctgccccaccggattcaaccttccccgccggcagact
tcaggtatagattacaacagggccgcccttctgatcgccgttttggaaaaaaaattaggg
cttaatctcgcccatgaagacgtttatatcaatgcggccggcgggataaaactcaccgaa
ccggccgtggatcttgcggttatcaccgcaatagtatcgagttttaagaacaaaccggta
agggatgtggtgatcataggggaagtgggtcttgcgggcgaggtaaggtccgtaggctac
attgaaaagagggtgaacgaagccgcaaagctaggctttaaagaagcgataatcccctat
gacaacatgagggatttaaaaaatacggtaggcatcgacatttcgggggtaaaggaactg
aaagacgctatagaagccgcttttgattga
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