Thermosediminibacter oceani: Toce_2148
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Entry
Toce_2148 CDS
T01289
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc03030
DNA replication
toc03430
Mismatch repair
toc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Toce_2148
03430 Mismatch repair
Toce_2148
03440 Homologous recombination
Toce_2148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
toc03032
]
Toce_2148
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_2148
Enzymes [BR:
toc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Toce_2148
DNA replication proteins [BR:
toc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Toce_2148
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Toce_2148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
TIP49
AAA_22
RuvB_N
AAA_5
AAA_30
AAA_16
AAA_19
AAA_7
AAA_14
RCF1-5-like_lid
AAA_assoc_2
AAA_18
DUF815
AAA_2
Motif
Other DBs
NCBI-ProteinID:
ADL08861
UniProt:
D9S0K3
LinkDB
All DBs
Position
complement(2149038..2150753)
Genome browser
AA seq
571 aa
AA seq
DB search
MAYVALYRRYRPRDFDEIVGQEAIVRTLKNQIRTGKIGHAYLFCGMRGTGKTSTARVFAK
ALNCEQGPTDTPCNRCRNCLAINEGGMIDVIEMDAASNRGIDDIRTLRESVNFPPSEGRY
RVYIIDEVHMLTTEAFNALLKTLEEPPEHVVFILATTEPNKLPSTILSRCMRFDFRRVQT
RELVSHLKRISAENGVEAEDKALALIARSSQGSMRDALSLLDKALAFGGDKLTYRDALSL
FGAVGDDLFFEISRAVKQRAPGRILDIIEEVVGLGKDLLRFTDDLMGFYRNLLMVSIGAD
RNLVDVTDEEYGELEALAKSYSREEILNILDLLKTASNDVRWASQPRTVLEAAMVKLALP
ELWTGETAPAARIKALEERVEELEKRLEGFSGSSPAYEAQKPDTGGASAGSQAENPVTGG
VPARTEVSREVTPERASARQTKSGEVRRENPGKELLELKEKWPRVLEELAKKGKMTVVNV
MEACRVEPVELQKGNLFLSFEGFDGQKALIEIQKNIIEEAIKNITGMEIAVKGFRKAEEA
ASRDSKDVSDEEFIRSAIELFGEDLVEIDDN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgtggccctatacaggaggtacaggcccagggatttcgacgaaatcgtaggc
caggaagccattgtcaggacattaaaaaaccagatcagaaccgggaaaattggtcacgcc
taccttttttgcggtatgaggggcaccggtaagaccagcaccgcgagggttttcgccaaa
gctctgaattgcgaacagggccccaccgataccccctgcaaccggtgcaggaactgcctt
gccatcaacgaaggcggcatgattgacgtcatcgagatggatgcggcttcaaaccggggc
atcgacgacatacgcaccctcagagaaagtgttaatttccctccttccgaaggacggtac
agggtatacataatcgacgaggtgcatatgctcaccaccgaagccttcaacgccctcctg
aaaaccctcgaggagccgccggagcacgtagtgttcattcttgccaccaccgaacccaac
aaactcccgtctaccatcctttcccgctgcatgaggtttgatttcaggagggtacagacc
agagaactggtgtcccacctgaagaggatttcggcggaaaacggcgtcgaggctgaagac
aaagccctcgccctcatagccaggagctcgcaggggtccatgcgcgatgcccttagcctg
ttggacaaggcgttggcctttggcggtgataagctcacctaccgggatgccctttcgctc
ttcggagcggtgggcgacgacctgttcttcgagatttcgcgggcggtaaagcagagggct
cccggcaggatcctcgatatcatcgaggaagttgtaggccttgggaaggaccttttgcgc
ttcaccgacgacttgatgggattttacagaaatttgctcatggtttccataggcgccgac
aggaacctggtggacgtaaccgacgaggaatacggggaacttgaggcccttgcaaaaagt
tattcccgagaagaaatcctaaacatactggaccttttaaaaacggcctccaacgacgtc
cggtgggcgtcacagccccgaacagtgttggaagccgcaatggtaaagctggctctgccg
gagctctggaccggcgaaacggcgccggcggcccggattaaggccctggaggagagggtt
gaggagttggaaaaaaggctggaggggttttccggtagctctcccgcctatgaagcacaa
aaacccgacaccggcggcgcatccgctggctcccaggccgaaaaccctgtaaccggcggt
gtgccggcaaggaccgaggtatcccgggaagtgacgcccgaaagggccagtgcccgtcaa
acgaaaagcggggaggtccggcgcgaaaatcccgggaaagaactgctggaattaaaggaa
aaatggccccgggtgttagaggaacttgcaaagaaggggaagatgaccgtggtcaacgtc
atggaggcctgccgggtcgaacccgtggaacttcaaaagggcaacttgttcctttccttc
gaggggtttgacggccaaaaagctttaatagaaattcaaaaaaatataatagaggaagcg
ataaaaaatataacgggcatggagattgccgtaaaggggtttagaaaggccgaggaggct
gcgagccgggattcaaaggatgtctccgatgaggagttcatcaggagcgccatcgagtta
ttcggtgaggacctggttgaaattgacgataattaa
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