Talpa occidentalis (Iberian mole): 119230629
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Entry
119230629 CDS
T07495
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03082
ATP-dependent chromatin remodeling
tod04714
Thermogenesis
tod05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119230629 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119230629 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119230629 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119230629 (SMARCA2)
03036 Chromosome and associated proteins [BR:
tod03036
]
119230629 (SMARCA2)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119230629 (SMARCA2)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119230629 (SMARCA2)
Chromatin remodeling factors
BAF complex
119230629 (SMARCA2)
PBAF complex
119230629 (SMARCA2)
GBAF(ncBAF) complex
119230629 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
119230629
NCBI-ProteinID:
XP_037347844
LinkDB
All DBs
Position
Unknown
AA seq
1573 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSAEFPQEGMHQMHKPIDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLIPGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQPPPQPQPQPPQPAQQQALV
SYNRPSGPGPELSSQSTPQKLPVPTPSGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSP
ILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKAT
VELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQK
IEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETER
IEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKK
KRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQL
DAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQI
IETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVS
LYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAP
SVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK
NHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPF
AMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKIL
YRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSN
GVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLD
GTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQ
DRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFL
QAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEE
DELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEM
EEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINY
KDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIR
NHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESN
EEEEEEEEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQD
ENEQSEASGTDDE
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcccacagacccgggtgcgatgccccacccaggaccttcaccggggccagga
ccctcacctggaccaattctgggacctagcccagggccaggcccatctccaggttctgtc
cacagcatgatgggaccaagtcccggacccccaagtgtctcccaccctatgccaacaatg
ggatctgctgaattcccacaggaaggcatgcatcaaatgcataagcccattgacgggatg
catgacaaggggattgtagaagacatccactgtggatccatgaagggcaccggtatgcga
ccccctcacccaggcatgggcccccctcagagtcccatggatcagcacagccaaggttac
atgtcaccacacccatctccattgggagccccagagcatgtctccagcccgatgtctgga
ggaggcccgaccccaccgcagatgccgccgagccagccagggcccctcatcccgggtgat
ccacaggcgatgagccagcccaacagaggtccctcgcctttcagtcctgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcccggggccagcccctccctgaa
acactgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcagcagcaacag
cagccgccgccacagccacagccacagccaccgcagccagcgcagcagcaggcccttgtt
agctacaacagaccatctggcccagggccggagctgagcagccagagcaccccgcagaag
ctgccggtgcccacgcccagtggccggccttcgcccgcgccccccgcagcagcgcagccg
cccgcagccgcggtgcctgggccctccgtgccgcagcctgcccctgggcagccctcgccc
atccttcagctgcagcagaagcagagccggatcagccccattcagaaaccacaaggtctg
gaccccgtggagattctgcaggagcgagaatatagacttcaggctcgcatagctcatagg
atacaagaactggaaaatctacctggctctttgccaccagatttacgaaccaaagcaact
gtggaactgaaagcacttcggttactcaatttccagcgtcagctaagacaggaggtggtg
gcctgcatgcgaagggacacgaccctggagaccgctctcaactccaaagcttacaaacgg
agcaagcgccagacccttcgggaggcccgtatgacagagaaactggagaagcagcagaag
attgagcaggagaggaagcgccggcagaagcaccaggaatacctgaacagtattttgcaa
catgcaaaagattttaaggagtaccataggtctgtggctggaaagatccagaagctctcc
aaagcagtggctacttggcatgccaacacagaaagggagcagaagaaagagacagagcgg
atcgaaaaggagagaatgaggagattaatggctgaagatgaagaaggctatagaaaactg
attgatcaaaagaaagacaggcgtttagcttaccttctgcagcagactgatgagtatgtg
gccaacctgaccaacctggtttgggagcacaagcaagcccaagcagccaaagagaagaaa
aagaggaggagaaggaagaagaaggctgaggagaatgcggagggaggagaatctgccctg
ggaccagatggagagcctatagatgagagcagtcagatgagtgacctccctgttaaagtg
actcacacggaaaccggcaaggtcctgttcgggccagaagcacccaaagcaagtcagctg
gatgcctggttggaaatgaatcctggttatgaagttgcccctagatcggacagtgaagaa
agtgattctgattatgaggaggaggatgaggaagaagagtccagccggcaggaaaccgaa
gagaaaatacttctggatccaaacagtgaagaagtttccgagaaggatgccaagcagatc
attgagacggcaaagcaagacgtggatgacgaatacagcatgcagtacagcgctaggggc
tcccagtcctactacaccgtggcccatgccatttcagagagggtggagaagcagtctgcc
ctcctcattaatgggaccctgaagcattatcagctccagggcctggaatggatggtttcc
ttgtataataacaatttgaacggaatcttagctgatgaaatggggctagggaagaccata
cagaccattgcactcatcacttatctgatggagcacaaaagactcaatggcccctatctc
atcattgttcccctttcgactctctctaactggacatatgaatttgacaaatgggctccg
tctgtggtgaaaatttcatacaagggcacccctgccatgcgtcgctccctcgttccccag
ctgcggagtggcaaattcaacgtcctcctgactacttacgagtacattataaaagacaag
cacattcttgcaaagattcggtggaaatacatgatcgtggacgaaggccaccgaatgaag
aatcaccactgcaagctgactcaagtcctcaatactcactatgtggctcccagaaggatc
ctcttgactggaaccccattgcagaataagcttccagaactctgggctctcctcaacttt
ctcctccccacgatttttaagagctgcagcacattcgaacagtggtttaatgctcccttt
gccatgactggagaaagggtggacttaaatgaagaagaaactatactgattatcaggcgt
ctacataaggtgttgagaccatttttactgaggagactgaagaaagaagttgaatcccag
cttccagaaaaagttgaatatgtgatcaagtgtgacatgtcagctctgcagaagatcctg
tatcgccacatgcaagccaaagggatcctcctcacagatggttctgagaaagacaagaag
ggaaaaggaggtgcaaagacacttatgaacactatcatgcagttgagaaaaatctgcaat
cacccatacatgtttcagcatatcgaggaatcctttgctgagcacctgggctattcaaat
ggggtcatcaatggggctgaactgtatcgggcctcaggaaagtttgagctacttgatcgt
attctgccaaaattgagagcaactaaccaccgcgtgctgcttttctgccagatgacgtcc
ctcatgaccatcatggaggattactttgcttttcggaacttcctttacctgcgcctcgac
ggcaccaccaagtctgaagatcgtgctgctttgttgaagaaattcaacgaacctgggtcc
cagtatttcattttcttgctgagcacaagagctggaggcctgggcttaaatcttcaggca
gctgatactgtggtcatctttgacagtgactggaatcctcatcaggacctgcaggcacaa
gaccgggctcaccgcattggccagcagaatgaggtgcgggtgctgagactctgcactgtg
aacagtgtggaggagaagatcctcgcagcggccaagtacaagctgaatgtggaccagaaa
gtgatccaggcaggcatgtttgatcaaaagtcgtcaagccacgagcggagggcattcctg
caggccatattggagcacgaagaggaaaacgaggaagaagatgaagtaccagatgatgag
actctgaaccaaatgatcgctcgacgagaagaagaatttgatctttttatgcgcatggac
atggaccggcggagggaagatgcccggaatccgaagcgcaagcctcgcttaatggaggaa
gatgagctgccctcctggattattaaagatgatgcggaagttgaaaggcttacgtgtgaa
gaggaggaggagaaaatatttggtagggggtctcgccagcgccgggatgtggactacagc
gatgccctcacagaaaagcagtggctgagggccattgaagacggcaatttggaagaaatg
gaagaggaagtacggctgaagaagcgaaaaagacgaagaaatgtggataaagatcctgtg
aaagaagatgtggaaaaggctaagaagagaagaggccgcccccctgcggagaaactatca
ccaaatccccccaaactgacaaagcagatgaacgccatcatcgatactgtgataaactac
aaagacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaaggaaac
agttcagggcgacagctcagtgaagtcttcattcaattaccttcaaggaaagaattacca
gaatattatgaattaattaggaagccggtggatttcaaaaaaataaaggaaagaattcgt
aatcataagtaccggagcctgggtgacctggagaaagatgtcatgcttctctgtcataat
gcacagacattcaacttggagggatcccagatctatgaagactccatcgtcttacagtca
gtgtttaagagtgctcggcagaaaattgccaaagaggaagagagtgaggatgaaagcaat
gaagaggaggaggaagaagaggaggaggagtcagagtcagaggcaaaatctgttaaagta
aaaatcaagctcaataaaaaagatgagaaaggccgggacaaaggaaaaggcaagaaaagg
ccaaatcgaggaaaagccaaacctgtcgtgagtgacttcgacagtgatgaagaacaggat
gaaaacgaacagtcagaagcaagtggaactgatgatgagtga
DBGET
integrated database retrieval system
