Talpa occidentalis (Iberian mole): 119230767
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Entry
119230767 CDS
T07495
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03440
Homologous recombination
tod03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119230767 (BRIP1)
03460 Fanconi anemia pathway
119230767 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tod03400
]
119230767 (BRIP1)
Enzymes [BR:
tod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119230767 (BRIP1)
DNA repair and recombination proteins [BR:
tod03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119230767 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
119230767 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Smr
Motif
Other DBs
NCBI-GeneID:
119230767
NCBI-ProteinID:
XP_054544754
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MSSEWSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPVDEGLNKKAEVPLSCCCTCHSKNFTNNVNQESSHHFSSPSTPPSERNRS
SSRACNDSPEKTTLAAKLSAKKQTSTYRGENDDFQVEKKRIRPLETTQQIRKRHCFEKEA
QHLDATVAPGKTTQLNSPLGKINSYSPQKPPGPCSRCCCSTKQENSQESSNTLKKEKSGI
SKIPKIYFGTRTHKQIAQITRELWKTAYSGVPMTILSSRDHTCVHPEVVGNFNRKEKCME
LLDGKNGKFCYFYHGVHKMSDQNTLQTLHGMKKAWDIEELISLGKKLKACPYYTARELIK
DADIIFCPYNYLLDAQIRETMDINLKEEVVILDEAHNIEDCARESASYSITEVQLWFARD
ELDIMVSNNIRKKDHEPLRAVCYSLINWLEANSKHLVERAYESSCKIWSGSEMLINLHGM
GITTATFPILQGHLSAVLQKEEKVLPIHGRGESREVPIISASTQIMLKGLFMVLDYLFRQ
NSRFADDYRIAIQQTYSWINQPDISDKNGLMVLPKSKKRLRQKTAVHVLNFWCLNPAVAF
SDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVVDNSQVWVGTIGSGPKGRNL
CATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLYTGLWQNLELL
KTVIVEPQGGEKTDFDELLQEYYDAIKFKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWG
ALILVDDRFRSNPNRYISGLSKWVRQQVHHHSTFESALESLAEFSKKHQKDIDISKEERK
SRKDSESTLEVAFSKDIITSTYFSETANHLSPENPRENEAKMCTQELQCPKMNPSLPSGI
VSRKEKDDPVLVKESAQAVKPEKIVISRSISPTFNKQAEGVNLCSFNSLGQCLTGKTLTA
APQCRSLEDDASSSSTFKTEKGYKTVLPLTNKCESSSPTVNTSFELCPQSETVIPSIKPD
TTLLKKNHSEQLLCCEETLTPDVESSPVSEESQVSTSNRAFESEAEDESIYFTPELYDPI
ETNEEINQLVATDQDNRLANNSNCILVEDLFENRAMKGLDSDKEMNTEDCTDTKXFMHVK
ESKIDDISSNVKTTHINEXELGKAHETDTKNLKLSPS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaatggtctgaatatacaattggtggagtgaagattaattttccttgtaaa
gcttatccatcacagcttgctatgatgaattctattgtcagaggattaaacagtaaacag
cattgtttactggagagtcccacaggaagtgggaaaagcttagccttactttgttctgct
ttagcatggcaacagtctcttagtgggaaaccagtggatgaaggcttaaataaaaaagct
gaagtaccattatcatgttgttgtacatgccattcaaagaactttacaaacaatgtgaat
caagaatcttcacatcatttcagcagtccaagtacaccaccttctgaaagaaatagaagc
tcttcacgagcttgtaatgactctcctgagaaaactactttggctgcaaagctgtctgcc
aaaaaacagacatccacatacagaggtgaaaatgatgattttcaagtggagaagaaaaga
atcagacccttagaaactacacaacagattagaaaacgtcattgttttgagaaggaggca
cagcatttagatgcaacagttgcaccgggaaagactacacaactcaactcccctttagga
aagataaactcctattctccacaaaagccccctggcccctgctctagatgctgttgctcc
actaaacaagaaaacagccaagagtcttcaaataccttgaaaaaagaaaagagtgggata
tccaagatacccaaaatatattttgggacacgtacacacaagcagattgctcagattact
agagagctctggaagactgcatactcaggggtaccaatgactattctttccagcagggat
catacttgtgtccaccctgaagtagtaggtaacttcaatagaaaagaaaagtgcatggaa
ttgctggatggaaaaaatggcaaattctgctatttttatcatggcgttcataaaatgagt
gatcaaaacacattacagactctccacgggatgaagaaggcttgggatatagaagaactc
atcagtttggggaaaaaactaaaagcatgtccgtattatacagcacgagaactaataaaa
gatgctgacataatattttgtccctacaactatcttctcgatgcacaaataagggaaact
atggatatcaatctgaaagaagaggtggtcatcttagatgaggctcataacattgaagat
tgtgctcgggaatcagcaagttacagtataacagaagttcagctttggtttgctcgagat
gaactagatattatggtcagcaataatataaggaagaaagaccatgaacccctacgggct
gtgtgctatagcctcattaattggttggaagcaaattctaaacatcttgtagaaagagct
tatgaatcatcctgtaaaatatggagtggaagtgaaatgctcataaatttacatggaatg
ggcatcactactgctacttttcccattttgcagggacatttatctgctgttcttcaaaaa
gaagaaaaagtcttaccgattcatggtagaggggagtcaagagaagtacctattattagt
gcttccactcaaataatgcttaaaggactttttatggtgcttgactatctttttaggcaa
aatagcagatttgcagatgattatagaattgctattcaacagacttactcttggataaat
cagcctgatatctcagataaaaatggattgatggtgctaccaaaatctaaaaaacgttta
cgacaaaaaactgcagttcatgtgctaaacttttggtgcttaaatccagctgtggctttt
tcagatattaatggcaaagttcgaacaattgttttaacatctggcacattatcaccaatg
aaatccttttcctcagaacttggagttacatttactatccagctggaggctaatcatgtt
gttgataactcacaggtttgggttggcaccattgggtcaggccccaagggacggaatctc
tgtgctacctttcaacacacagaaacatttgagtttcaggatgaagtgggagcactttta
ttatctgtgtgccagactgtgagccaaggaattctgtgtttcttgccatcttacaagtta
ttagaaaagttaaaagaacgttggctgtatactggtttatggcagaacctggagttgttg
aaaacagtcattgtggaaccacaaggaggagaaaaaactgattttgatgaattactgcag
gaatactatgatgcaatcaagttcaaaggagagaaagatggagctctcctggtagcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtgata
acaataggaattccttttccaaatgtgaaagatctacaggttgaactaaagcgacaatat
aatgaccatcattcaaaattgaggggtcttttaccaggccgtcaatggtatgaaattcaa
gcatacagggccttgaaccaggccctaggcaggtgtattcggcacaaaaatgattgggga
gctctaattctagtggatgatcgctttaggagtaacccaaatcgatatatatctggactt
tcgaaatgggtacggcagcaggttcatcatcattcaacctttgaaagtgctttggagtcc
ttggctgaattttccaaaaagcaccaaaaagacattgatatatccaaagaagaaaggaag
tccagaaaggacagtgagtctacacttgaagtggcgttttccaaagacattattacctct
acttacttctcagagacagcaaatcatctatcaccagaaaatcctagggaaaatgaagca
aaaatgtgcacccaagaattacagtgccctaaaatgaatccatctctaccaagtggcatc
gtctccagaaaagaaaaagatgatccagtattagtgaaagagtctgcccaggcagtgaaa
ccagaaaaaattgtgatttccagatctataagcccaaccttcaacaaacaagcagaagga
gtcaacttgtgtagctttaattctttgggacagtgtcttactggtaaaactctgactgca
gcacctcagtgcaggtcattagaagatgatgcctctagttcttccactttcaagacagaa
aagggatataaaactgttttgccactcaccaataaatgtgagtcctcatctcctacagta
aacacatcatttgaactgtgccctcaatcagaaactgttattccatcaataaagcctgat
actactcttctgaaaaagaatcattcagaacagctgctctgttgtgaagaaaccctaacc
ccagacgttgaatcgtctccagtaagtgaagaatctcaagtttctacttcaaatagagct
tttgaaagtgaagcagaagatgagtctatctatttcacacctgaactttatgatcccata
gaaacaaatgaggaaataaatcaactagttgcaactgatcaggacaatagattagctaat
aattcaaactgcattttagtggaagatctttttgaaaacagagctatgaaaggattggat
tcagacaaagaaatgaatactgaggattgcacagacacaaagnntttcatgcatgttaaa
gaaagtaaaattgatgacattagtagtaatgtgaaaacaactcatataaatgaanttgaa
ctgggaaaagctcatgaaacagacacaaagaacttaaaactctctccttcctaa
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integrated database retrieval system
