Talpa occidentalis (Iberian mole): 119231271
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Entry
119231271 CDS
T07495
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tod03036
]
119231271 (SHOC1)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119231271 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
FPV060
Motif
Other DBs
NCBI-GeneID:
119231271
NCBI-ProteinID:
XP_037348894
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MLKFVLLSKKEDMFSAFKYCAIDYLYENAVKKKLCVDAFLLRIPSCLYQDENYTGIIDNK
YRRPWTRVSAVSVWGMTDSSVLDQWKASLFLEDFLEKKTGTEMATYINCDFEEIVPSSNP
NSQTEVEEASMYTHKDYSEVFTLVSCLEKCPTLQAQNQDFSIDDEEIIFVNNSACKNQLP
TLHTLLSRLKVFLVKDPLLDFKGQIFKEADFSRECFDFQGDWKDFVKEDFHMDKENFCVE
KLEDTVGLNEAPSLLLECEFLIPTSPKQETNIPSLSELKESLNLIPEIISYEDENEKLFK
RDITTKQGIDIEDIKCNSTEILAIQSQCEPECNKLVELEMPLSHLHLTNQQPSSVNSLCT
GLQTFPLSPVCKISLLTAEESASKYYKMWQLESCRNSLNSFLLKVPKTEAPDSQYSVTDL
KEIFSIEEESLVVNPINADWWKQAGLNLIVTETLEHLNTSLCQGDLLSHDTKMEIFLPTK
ELQLESWLEHKGCSSPVVLVDEESTSDHLSLPQKSPSVAKEIPDLCLSDECVTVKTPTKE
ERPKDDLEIVGGIIENKDYFECDNTVSLTESSSSSKIEKSSFKHGKKWGHDLDPLNDFIM
LRNKYEICTSKNEVTDNGEKDELQDKECSLTLRGKSPIVCINKTLEVVNQERTEDHVIEI
QASDSQCQAYCILEAAATPILKNLAYFCTLPANWKFATVIFDQTRFFLKEQEKIISDAIH
QGTNDEREMTFKHAALLHLLVTIRDVLLTCSLDSALGYLSNAKDIYKSILGSYLGDIWRQ
LEIVQFIRGKKPETNYKIQELQCQILSWMRSEHRIQVLIIIRMDSDDEKHLLIKILSKME
GLTLTVLHSNERKEVLESEGVLNGTSSCVVVYNQHIGADFPWSNFSFVVEYNYVENSCWT
KHCETLNIPYTAFKVILPDIVLKRNTFLDRFGGFPLEIQIPYVFFASEGLLNSPEILQLL
ESNYNITLVERCCNESLKLFGGTEHYIVVTIDEHTAILLQDLEELNCEKASDNIIMRLMA
LSFQYSYCWIILYTKEILNSVYCFTEKTLHHLALIYAALVSSGLKSQELDVKLILSPGVE
ETALIIRQIADHNLMTSKRDPHEWLDKSWLDVSPSKEEMYLLDFPCINPLVAQLMLNKGP
SLLWILFASLCQLQELLPEVPEKVLKPKAKQLESPLMGKWLNKLWYIHIMD
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatttgttctgctctcaaagaaagaagatatgttttcagcgttcaaatattgt
gcaatagactacttatatgagaatgcagttaaaaagaagctttgtgtagatgctttttta
cttcgaatcccttcatgtttatatcaagatgaaaattacacaggcattattgataataaa
tataggaggccatggacaagagtctcagctgtttcagtttggggcatgactgatagctca
gtcttggatcaatggaaagcaagtctctttctggaggattttcttgagaaaaaaacaggc
acagaaatggcgacctatattaactgtgactttgaggaaattgttccaagttcaaaccca
aactcccaaactgaagtagaggaagccagcatgtacacccataaggactacagtgaagta
tttacacttgtcagctgtttagaaaaatgtccaacacttcaagcacagaaccaagatttt
tctattgatgatgaagaaattatttttgtaaataactcagcctgtaaaaatcagctacca
actttgcatactttgttgagtagactaaaagtatttttggtaaaagatccccttttagat
ttcaaaggacaaatcttcaaagaagctgatttttccagggaatgtttcgattttcaagga
gattggaaagattttgtaaaagaagattttcacatggacaaagaaaacttctgtgtggag
aagctggaagacacagtaggcttaaatgaagctccatcacttttgcttgaatgtgaattc
ttaatacccacaagccccaaacaagaaactaatattccttcactgtcagagctgaaggaa
tcattaaacttaataccagaaataataagttatgaagatgaaaatgaaaaacttttcaaa
agagatatcactaccaaacagggaattgacattgaggatataaaatgcaactccacagag
attttggccattcaaagtcagtgtgagccagaatgtaacaaattagtagagttagaaatg
ccattaagtcatctacacctaacaaaccaacaaccttcttcagtgaattcattatgtaca
ggacttcagacatttccactttctcctgtttgtaaaattagtttgcttactgctgaagaa
tcagccagcaaatactataagatgtggcagttagaaagctgcagaaactctttgaactca
tttttgcttaaagtgccaaaaactgaagcgcctgacagccaatattcagttacagatttg
aaagagatattttctattgaagaagaaagccttgtagttaatcctataaatgcagattgg
tggaaacaagcaggactaaatctgatagtgacagaaactttggaacatctgaacacaagt
ttgtgtcagggtgacctattgtctcatgatactaaaatggaaatatttttgcctacaaaa
gaactccagttagaatcatggctagaacataaaggttgttcctcacctgttgtccttgtt
gatgaggaatccacaagtgatcatttatcacttccacaaaaaagtccatctgtggcaaaa
gaaataccagatctgtgtttgtctgatgaatgtgtcactgttaaaacaccaacaaaagaa
gaaagaccaaaggatgatctagaaatcgttggtggaataattgaaaataaagattacttc
gaatgtgacaacacggtatcattgactgaatcatcttcatcttccaaaattgaaaagtca
tcctttaaacatggtaaaaaatggggacatgatttggaccctttgaatgactttattatg
ctgcgaaataaatatgagatatgtacctcaaagaatgaagtcacagacaatggtgaaaaa
gatgaacttcaagataaagaatgttctttgactcttcgaggaaaaagcccaattgtttgt
attaataaaaccctagaggtagtcaatcaggaaaggactgaagatcatgtcattgaaatt
caggcatcggatagccagtgccaagcgtattgtatcctagaagctgcagctactcctatc
ttaaaaaaccttgcatacttctgcactcttcccgctaactggaaatttgccactgttatt
tttgaccaaacaaggttcttcttaaaggaacaagaaaaaattataagtgatgctattcac
caaggtacaaatgatgaaagagaaatgacattcaagcatgctgctctcttacaccttctg
gtaacaatcagagatgtgcttttaacatgtagcttggactcagcattaggatatttgtca
aatgcaaaagacatctacaaaagcattttaggctcttacttgggtgacatttggagacag
ctggagattgtacagtttataaggggaaaaaagcctgaaaccaattataagatacaagaa
ttgcaatgtcagatactaagttggatgcgaagtgaacaccgaattcaggtgctgattata
ataagaatggactcagatgatgaaaaacatttactcattaaaatccttagcaaaatggaa
ggtttaactttgactgtcttacactcaaatgaaaggaaagaggttttggaatccgaaggt
gttttaaatggtacaagttcctgtgtagtcgtatacaatcaacatattggagcagatttc
ccctggagcaatttctcatttgtggtggaatacaattatgtagaaaactcctgttggact
aaacactgtgaaacactgaacattccttacacggcctttaaagtgattcttccagacata
gttttaaaaagaaacaccttcctagatagatttggtggttttcctttggaaattcagatt
ccatatgtattttttgcatctgaaggacttcttaacagtccagaaatacttcagttgcta
gaatccaactataatatcacactagtggaaagatgctgcaatgagtcattgaaactcttt
ggaggcacagaacattatattgtggttacaattgatgaacacactgccatactcttacag
gacctagaagaattgaattgtgaaaaggcatcagacaatatcattatgagactgatggca
ttatcattccagtacagctattgttggataattttatataccaaagaaatattaaactca
gtgtactgttttacagaaaagacacttcatcacctagcactgatttatgctgctttggtt
tcatctggcctaaaatcacaggaactggatgtaaagcttatactttccccaggagtggaa
gagactgccttgataatacgacaaattgctgaccataacttaatgacctcaaagagagat
cctcatgagtggttggataaatcctggcttgacgtttcaccatctaaggaagaaatgtac
ttgcttgattttccatgtattaatccattagtagctcaactcatgttaaataaaggaccc
tcactgctctggatattatttgcaagtctttgtcaacttcaggaactcctgcctgaagtt
ccagaaaaggtactaaagccaaaagcaaaacaacttgaaagtcctttaatgggcaagtgg
ttaaacaaactatggtatatccatatcatggactaa
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