Talpa occidentalis (Iberian mole): 119231723
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Entry
119231723 CDS
T07495
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119231723 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tod03041
]
119231723 (PRPF4)
Spliceosome [BR:
tod03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119231723 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
119231723
NCBI-ProteinID:
XP_037349344
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All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MASSRASSTQATKTKAPDDLVAPLVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGI
EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYHQTWYHEGPNSLKVARLW
IANYSLPRAMKRLEEARLHKEIPETTRTSQVQELHKSLRSLNNFCSQIGDDRPISYCHFS
PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA
ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH
QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIHFSPNGY
HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcacgagcctcctccacgcaggcaaccaaaactaaggcaccagatgactta
gtcgctcctcttgtgaagaaaccgcatatctattatggaagtttggaggagaaggagagg
gagcgtcttgccaaaggagagtctgggattttaggaaaagaaggacttaaagcaggaatt
gaagctgggaatattaacataacctctggagaagtgtttgaaattgaagagcacatcagc
gagcgacaggctgaagtactagcagagtttgagagaaggaagcgagcccggcaaatcaat
gtttccacagacgactcagaggtcaaggcttgcctcagagccttgggggagcccatcaca
ctttttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctctcagtggtt
ggtactgatgccttaaaaaagaccaaaaaagatgatgagaaatctaagaagtccaaagaa
gagtatcatcaaacttggtatcatgaaggaccgaacagcctgaaggttgctagactgtgg
attgctaattattcattacccagggcgatgaaacgcttggaggaggcccgtcttcacaaa
gagattcctgagacaacaaggacctctcaggtgcaagagctgcacaaatctctccggtct
ttaaataatttctgcagtcagattggggacgaccgacctatctcctactgccattttagt
cccaactccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgtt
cctgattgcaacctccttcacactcttcgaggccataacacaaatgtaggagcaattgtc
ttccatcccaaatccactgtatccttggaccaaaaagatgtcaacctggcctcgtgtgct
gctgatggttctgtgaagctttggagccttgacagtgatgagcccgtggcagatatagaa
ggccatacagtgcgtgtagcccgtgtaatgtggcatccatcgggacgtttcttgggtacc
acctgctatgaccgctcgtggcgcttatgggatttggaggctcaggaggagatcctgcat
caggaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggct
ggcactgggggactggatgcatttggtcgagtttgggacctgcgcacaggacgttgtatc
atgttcctagaaggccacttgaaggaaatctatggaatacatttctcccctaatggctac
cacatcgcaactgggagtggtgacaatacctgcaaagtgtgggaccttcgacagcggcgc
tgtgtgtataccatccctgcccatcagaacttagtgactggtgtcaagtttgagcctatc
catgggaacttcttgctcactggtgcctacgataacacagccaagatctggacccaccca
ggctggtccccactgaagactcttgctggccatgaaggcaaagtgatgggcctagacatt
tcttctgatgggcagcttatagccacttgctcatatgacaggaccttcaaactctggatg
gctgaatag
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