Talpa occidentalis (Iberian mole): 119232568
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Entry
119232568 CDS
T07495
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119232568 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tod03400
]
119232568 (LIG3)
Enzymes [BR:
tod01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119232568 (LIG3)
DNA repair and recombination proteins [BR:
tod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
119232568 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
119232568
NCBI-ProteinID:
XP_037350525
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MPIHLLPQHGVALLCMTLALKILFPSALRAFSRKEPCLFRKHYQPDIRQFSQWSETDLLQ
GHCLLQRRKPVLSFQGGNLRSWVSCLVFLPGSHVGLCGGPGKMAEQRFCVDYAKRGTAGC
KKCKEKIVKGICRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEG
WEELEDNEKEQISQHIADLSSKSASTPKKKAVVQAKLTATGQVTSPAKGTSFVTNTNPRK
FSGFSAKPNNSGEVHSSPTPKTSLSSSKCDPKHKDCLLRVFRKLCASVAENPSYNTKTQI
IQDFLRKGSAGDGFHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDL
EQGDVSETIRVFFEQSKSFPPAAKSLLTIQEVDEFLLKLSKLTKEDEQQQALQDIASRCT
ANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEKEPGR
RRTLSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFS
RSLKPVLPHKVAHFKDYIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFLD
ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKGSDLADMIN
RVIREGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGM
MSIFLMGCYDPSSQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIY
YPDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKE
LYQLSKERADFTVVAGDEGSSTTGSSSGENEGTSGTTVSRKASGTSPTAKKAGGKLTSPS
SKGSNKLTAKPSSVKVGEKQAMKSPVKVGQKRKAPDETPCQTKVLLDIFTGVRLYLPPST
PDFSRLRRYFVAFDGDLVQEFDTASATHVLGSRDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccatttgcttcctcagcatggtgttgcactactctgtatgactttggctctg
aagatactcttcccatcagccctccgtgctttcagccgaaaagaaccctgcctattccga
aaacattatcagcctgacataagacaattcagtcagtggtcagaaaccgatctgcttcag
gggcattgcctcctccagagaagaaagcctgttctgtcattccagggaggcaacctaagg
tcgtgggtctcctgccttgttttcttgccagggtcgcatgtgggactgtgcggtggtccc
ggtaagatggctgagcagcgcttctgtgtggactatgccaaacgtggcacagctggctgc
aaaaaatgcaaggaaaaaattgtgaagggcatatgccgaattggcaaagtggtacccaac
cccttctcagagtctgggggtgatatgaaggagtggtaccacattaagtgcatgtttgag
aaactggaacgcgcccgggccaccacaaagaaaattgaggacctcacagaactggaaggc
tgggaggagctggaagataatgagaaggaacagataagtcagcacattgcagatctgtct
tctaaatcagcgagcacaccaaagaagaaagctgttgtccaagctaagttgacagccact
ggccaggtgacatctccagcaaaaggcacttcatttgtcaccaacaccaatccccggaag
ttttctggcttttcagccaaacccaacaactctggggaagtccactcaagccctacccct
aagacaagtctgtcctcaagcaagtgtgaccccaagcacaaggattgtctgctgcgagtg
tttcggaagttgtgtgccagcgtggctgaaaatcctagctacaacacaaagacgcagatc
atccaagacttcctacggaaaggttcagcaggagatggttttcatggtgatgtgtaccta
acagtgaagctgctgctgccaggtgttattaagagtgtttacaacttgaatgataagcag
attgtgaagcttttcagccgaatttttaactgcaacccagatgatatggcacgagaccta
gagcagggtgatgtgtcagagacaatcagagtcttctttgagcagagcaagtctttcccc
ccagctgccaagagccttcttaccattcaggaggtggatgaattccttctgaagctctcc
aagctcaccaaagaggatgagcagcaacaggccctgcaggacatcgcctccaggtgtaca
gccaatgatctcaagtgcatcatcaggttgatcaaacatgatctgaagatgaactcaggt
gcaaaacatgtgttagatgcccttgaccccaatgcctatgaagccttcaaagcctcacgc
aacttgcaggatgtggtggagcgggtccttcacaacgagcaggagaaggagccaggccgg
aggcgaactctgagtgttcaggcctcgctgatgactcccgtgcagcccatgctggctgag
gcctgcaaatccattgagtatgcaatgaagaaatgtcccaatggcatgttctctgaaatc
aagtacgatggggagcgagtccaggtgcataagaacggggaccacttcagctacttcagc
cgcagtctcaagcctgtcctgcctcacaaggtggcccactttaaggactatatcccccag
gctttccctgggggtcagagcatgattctggactcggaggtgctcctgattgacaacaag
acaggcaaaccattgccctttggaactctgggagtacacaagaaagctgccttcctggat
gctaatgtctgcctgtttgtttttgactgtatttacttcaatgatgtcagcttgatggac
aggcccctgtgtgagcgacgaaagtttcttcatgacaacatggttgaaattcctaaccgg
atcatgttctcagaaatgaagcaagtcacgaaaggttcagatttggctgacatgataaac
cgggtgatccgggagggattggaagggctggtgctgaaggacgtgaagggtacttatgag
cctgggaagcggcactggctgaaagtgaagaaagactatttgaatgaaggggccatggct
gacacagctgacctggtggtccttggggccttctatggacaaggaagcaaaggcggcatg
atgtccatcttcctcatgggttgctatgatccaagcagccagaagtggtgcacagtcacc
aagtgtgctggaggccatgatgatgcgacacttgcccgcctgcagaaggaactggacatg
gtgaagatcagcaaggatcccagcaagatacccagctggctgaaaatcaacaagatctac
tatcctgacttcatcgtcccagacccaaagaaagctgctgtgtgggagatcacaggggct
gaattctctaaatccgaggctcacaccgctgatgggatttccatccgattccctcgctgc
acccgaatccgtgatgataaggactggaaatctgccaccaacctcccccaactcaaggaa
ctgtaccagctgtccaaggaaagggcagacttcactgtagtggctggagatgaggggagt
tccactacagggagcagcagtggagagaatgagggtacctcagggactactgtgtctcgc
aaggcctctggaacctcccccactgccaagaaggcaggagggaagctgaccagccccagc
agcaaaggcagcaacaaactgactgcaaagccttcctctgtgaaagtgggagagaagcag
gctatgaagtctcctgtgaaagtagggcagaagcggaaggctcctgatgagactccttgc
cagacaaaggtgctgctggacatcttcactggggtgcggctgtacctgccaccctctaca
ccagacttcagtcgtctcagacgctactttgtggcattcgatggggacctggtgcaggaa
tttgacacggcctcagccacacatgtgctgggtagcagggacaagaaccctgaggcccag
caggtctctccagagtggatttgggcgtgtatccggaaacggagactggtagccccctgt
tag
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integrated database retrieval system
