Talpa occidentalis (Iberian mole): 119233361
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Entry
119233361 CDS
T07495
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119233361 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119233361 (SMARCA5)
03036 Chromosome and associated proteins [BR:
tod03036
]
119233361 (SMARCA5)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
119233361 (SMARCA5)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
119233361 (SMARCA5)
RSF complex
119233361 (SMARCA5)
WICH complex
119233361 (SMARCA5)
B-WICH complex
119233361 (SMARCA5)
NORC complex
119233361 (SMARCA5)
BRF complex
119233361 (SMARCA5)
NuRF complex (fruit fly)
119233361 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
119233361
NCBI-ProteinID:
XP_037351509
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSSAAEPPPPPPAESAPPRPAAAGGGSGGANKGGPEGAAAPAAPAAAGAGPADPEMEEIF
DDGSPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKP
GRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRD
YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH
NWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNW
RYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSA
DDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQRE
WYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNS
GKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSI
NAYNEPNSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTV
RVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVF
ASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREK
QKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLF
ELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGF
TNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMA
QIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKL
GFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAE
KKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgcggccgagccgccgccgccgccgcccgccgagagcgcgccccccaggccc
gcggccgccggcggcgggagcggcggcgccaacaaaggcggccccgagggcgccgcggcc
ccggcggccccggccgcggcgggcgccggccccgcggaccccgagatggaggaaatattt
gatgatgggtctccaggaaaacaaaaagaaatccaagaaccagatcctacctatgaagaa
aaaatgcaaactgaccgagcaaatcgctttgagtatttattaaagcagacagaactgttt
gcacatttcattcaacctgctgcacagaagactccaacctcacctttgaagatgaaacca
gggcgcccacgaataaaaaaggatgagaagcagaacttgctgtcagttggggattaccga
caccgtagaacagagcaagaagaggatgaagaactactaacagaaagttccaaagcaacc
aatgtttgcactcgttttgaagactctccatcatatgtgaaatggggtaaactgagagat
tatcaggtccgaggattaaattggctcatttctttgtatgagaatggcatcaatggtatt
cttgcagacgaaatgggcctgggaaagactcttcaaacaatctctcttcttgggtacatg
aaacactatagaaacattcctggtcctcatatggttttggttcccaagtctacattacat
aactggatgagtgaattcaagagatgggtaccaacgctgagatctgtttgcttaatagga
gataaagaacaaagagctgcttttgtcagagatgttttattaccaggagaatgggatgtg
tgtgttacgtcttatgaaatgcttattaaagagaagtctgttttcaaaaaatttaattgg
aggtatttagttatagatgaagctcacaggatcaaaaatgaaaaatcaaagttgtcagaa
atagtgagagaattcaagactacaaatcgcctgctactaactggaacacctctgcagaac
aacttgcatgagctctggtcactgcttaattttttgttgccagatgtttttaattcagct
gatgactttgattcctggtttgatacaaacaattgtctgggggatcaaaagctggttgag
aggctgcatatggttctgcgtcccttccttcttcggagaattaaggctgatgttgagaag
agtttgcctccaaagaaggaagtaaaaatctatgtgggtctcagcaagatgcagagggaa
tggtatactaggatattaatgaaggatatagatatactgaattcagcggggaagatggac
aaaatgaggttgttgaacatcctgatgcagttgaggaagtgctgtaatcatccatatctc
tttgatggagctgaacctggtccaccttatacaacagatatgcatctagttaccaacagt
ggcaaaatggtggtgttagacaagctgctccctaaattaaaagaacaaggttcacgagta
ctaatcttcagtcagatgacaagagtattggacattttggaagattattgcatgtggaga
aattatgagtactgcagattagatgggcaaacaccccacgatgagagacaagactccatc
aatgcatacaacgaaccaaacagctcgaagtttgttttcatgttaagcacacgtgctggt
ggtcttggtatcaatcttgctactgctgatgtggtaattttgtatgattcagattggaat
ccccaagttgatctccaggctatggaccgcgcgcacagaattggacaaaccaagacagtc
agagtgttccgcttcataactgataacactgtggaagagagaatagtggagcgcgccgag
atgaagctccggctagactctatcgttatccagcaaggaagacttgtggatcagaatctg
aacaaaattgggaaagatgaaatgcttcaaatgatcagacacggggcaacacatgtcttc
gcttcaaaggaaagtgagattactgatgaggatattgatggtattttggagagaggcgca
aagaagactgcagagatgaatgaaaaactctccaagatgggcgaaagctcacttagaaac
tttacaatggatacagagtcgagtgtttataactttgaaggagaagattatagagaaaaa
caaaagatcgcattcacagaatggattgaacctcctaagcgagaaagaaaagccaactac
gctgtggatgcctatttcagggaagcgcttcgtgtcagtgagcctaaagcgcccaaggct
ccccggcctccaaagcaaccaaatgtccaggatttccaattctttcctccacgcttattt
gaattattggaaaaagaaattttatattacagaaaaactattgggtacaaggtacctaga
aatcctgacctaccaaatgcagcacaggcacagaaagaggaacagcttaaaattgacgaa
gctgaaccccttaatgatgaagagttggaggaaaaagagaaacttctcacgcagggattt
accaattggaataagagagattttaatcagtttattaaagctaatgagaagtggggtcgt
gatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtcattgaa
tactcagctgtgttctgggaaaggtgcaatgagctccaggacatagagaagattatggca
cagattgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagcacttgac
acaaagattggacggtacaaagcaccttttcatcagctgaggatatcatatggtacaaac
aaaggaaaaaactacactgaagaagaggatcgttttctgatctgtatgcttcacaagctt
ggatttgacaaagaaaatgtttatgatgaattacggcagtgtattcgcaactctcctcag
ttcagatttgactggtttctcaagtccagaactgccatggagctccagcggaggtgtaac
actttaattaccttgatcgaaagagaaaacatggaactagaggaaaaggagaaggcagag
aaaaagaaaagaggaccaaagccttcaacccagaaacgtaagatggacggagcacctgat
ggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
