Talpa occidentalis (Iberian mole): 119235435
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Entry
119235435 CDS
T07495
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03015
mRNA surveillance pathway
tod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119235435 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
119235435 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119235435 (PABPC4)
03041 Spliceosome [BR:
tod03041
]
119235435 (PABPC4)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119235435 (PABPC4)
mRNA cycle factors
Stress granule specific factors
119235435 (PABPC4)
Spliceosome [BR:
tod03041
]
Complex C
Other components
Complex C specific factors
119235435 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_occluded
RRM_7
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
119235435
NCBI-ProteinID:
XP_037354688
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDERLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAPRAVTPYK
YTSSVRSPHPAIQPLQAAQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctgtacgtgggcgacctgcactcg
gacgtcaccgaggccatgctgtacgaaaagttcagccctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggctatgcgtacgtcaacttccag
cagccggctgacgctgagcgagccttggacaccatgaactttgatgtgattaagggaaag
ccaattcgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaac
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatgacactttctct
gcttttggaaacattctgtcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaagaggctgccgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagaacgagaa
gctgagcttggagccaaagccaaggaatttaccaacgtttatatcaaaaactttggtgaa
gaggtggatgatgagcgtctcaaagagctattcagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atatttgtaggccgcgcacagaagaaagtggaacggcaggccgagttaaaacggaaattt
gaacagctgaaacaagagagaattagccgttatcagggtgtgaatctctacattaaaaac
ttggatgacacgattgatgatgagaagttaaggaaagaattttcaccttttggatcaatc
actagtgctaaggtaatgctcgaggagggaagaagcaaaggatttggctttgtctgcttc
tcctctcccgaagaggccaccaaggcagtcactgagatgaatggacgcattgtgggttcc
aagccactgtatgttgctctggcccagaggaaggaagagagaaaggctcacctcaccaac
cagtacatgcagagggtggctgggatgagagcgctccctgccagtgccatcctgaatcag
ttccagcctgctgctggtggctactttgtgccagcagttccacaggctcagggaagacct
ccatattacacgcctaaccagctagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatccgccagtctgggcctcgtcca
acgcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactact
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccacagctgtgcag
aacctagcacctcgtgctgctgttgctgccgctgcccctcgggctgtcacaccttacaaa
tatacctccagtgtccgcagccctcaccctgccatacagcctctgcaggcagcccagcct
gctgttcatgtgcaggggcaggagcccctgaccgcctccatgctggccgcggcacccccc
caggaacagaagcagatgctgggagaacgcttgttcccgctcatccaaacgatgcactca
aacctggcggggaagatcacggggatgctgctggagatcgacaactcggagctgctgcac
atgctcgagtcccccgagtctctccgctccaaggtggatgaagctgtggcagttctgcag
gctcaccatgccaagaaagaagccgcccagaaggtgggcgctgttgctgctgctacctct
tag
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