Talpa occidentalis (Iberian mole): 119236016
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Entry
119236016 CDS
T07495
Symbol
CLSTN1
Name
(RefSeq) LOW QUALITY PROTEIN: calsyntenin-1
KO
K22659
calsyntenin 1
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tod04515
]
119236016 (CLSTN1)
Cell adhesion molecules [BR:
tod04515
]
Cadherins
Cadherin related
119236016 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
EphA2_TM
Cadherin_C_2
Glyco_hydro_16
V_ATPase_I
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
119236016
NCBI-ProteinID:
XP_054547130
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MEPDASPQARPGRGARGQDGGDRAGDPRGPSLSGRLRASRGPARPALELAEGARTAPRSP
PVSSANGGVWGRRSGPTPGPGRPRPAQPPPATERECPAPPGRPGSGPRGSVLTAPRSGVG
GRRCARLPLAPGVSAPGDGAWRLLLLLLLGGRGVWAARVNKHKPWLEPTYHGIVTENDNT
VLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFTIHGQNVPFEAVVVDKSTGEGIIRS
KEKLDCELQKDYTFTLQAYDCGKGPDGANTKKSHKATVHIQVTDVNEFAPVFREKSYKAT
AVAGRQHDSLLRVEAEDADCSPQFSQICSYEIVTPDVPFSIDKDGYIKNTEKLNYGKEHQ
YKLMVTAYDCGKKRAAEDVLVKISVKPACTPGWQGWNNRVEYEPGTGALALFPSIHLETC
DEPVASVQATVELETEHIGKGCDRDTYSEKSLHRLCGAASGTAELLPSPSGSSNTVESGX
PRPDSNGHDSDQVFEFNGTQAVRVPDGVVSVNPKEPFTLSVWMRHGPFSRKKETVLCSSD
KTDMNRHHYSLYIHGCRLVFLLRQDPSEEKKYKPAEFHWKLNQVCDEEWHHYVLNVELPS
VTLYVDGAAHEPFSVTEDYPLHPSRIDTQLVVGACWQEYSGVESDNETEPAPVAPAGGDL
RMTQFFRGNLAGLTIRSGKLADKKVIDCLYTCKEGLDLQLPEDSGGGVKIQASPGQSVLT
LEGEDVGELVKAMQHVSYLNSRQFPTPGIRRLKITSRVKCFNEAPCAAVSPLDGYVMVLQ
PEEPKISLSGVHHFARAASEFESPEGVFLFPELRIISTITREVEPEGDGDEDPTVQESLV
SEEIVHDLDSCEVTVEGEELNPEQEGLEVDTGRLQQKRIEVSSSDLGVIFTGVDTMASYE
EALHLLRYRNWHTRALLDRKFKLVCSELNGRYVSNEFQVEVNVIHTANPVEHANHMAAQP
QFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRT
LRDQDAGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEQESEDGEEEDDITSAESE
SSEEEEGEHGRPQKGARPQQLEWDDSTLSY
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagccagacgcgtcgcctcaggcccggccgggccggggcgcccgggggcaggacggc
ggggaccgggcgggggacccccggggcccttccctgtccgggcggctccgcgcctctcgg
gggcccgcccgccccgcactggagctcgcagagggcgcgcgcacagccccccgaagtccc
ccggtttcctcagcaaatgggggcgtctggggtcgccgctcaggaccgacccccgggccc
gggcggccgcggccggcgcagcccccgccggccacggagcgcgagtgcccggccccgccc
ggccggcccggttcggggccccgcggctccgtcctcaccgcgccgcgctcgggggtcggg
gggcgacggtgcgcgcggctgcccctcgcccccggggtgtccgcccctggggatggggcc
tggcggctgctgctgctgctgctgctgggcggccgcggggtctgggccgcgcgagtgaac
aagcacaagccgtggctggagcccacctatcacggcatcgtcacggagaacgacaacacg
gtgctgctggacccgccgctcatcgccctggacaaggacgcgcccctgcgcttcgcagag
agttttgaggtgacagtcaccaaagaaggtgagatctgcgggtttacaatccacgggcag
aatgtccccttcgaggccgtggtcgtggacaagtccactggcgaggggatcattcgctcc
aaagagaagctggactgcgagctgcagaaggactacaccttcacgctgcaggcctacgac
tgcgggaagggccccgacggtgccaacaccaagaagtctcacaaggccaccgtgcacatc
caggtgaccgacgtgaatgaattcgccccggtgttccgggagaagtcctacaaggcgacg
gcggtggcggggcggcagcacgacagcctcctgagggtggaggccgaggacgcagactgc
tccccacagttcagccagatctgcagctacgagatcgtcacgcccgacgtgcccttctcc
atcgacaaggacggttatataaagaacacagagaagctgaactacgggaaggagcaccag
tacaagctgatggtcaccgcctacgactgcgggaagaagagggccgcggaggacgtcctg
gtgaagatcagcgtcaagccggcctgcacgcccgggtggcaaggatggaacaacagggtt
gagtacgagccgggcacgggcgccctggccctcttccccagcatccacctggagacgtgt
gacgagcccgtggcctcggtgcaggcgacagtggagctggagaccgagcacatcgggaag
ggctgcgaccgcgacacctactcggagaagtccctccaccggctctgcggtgctgcgtct
ggcaccgccgagctgctcccctctcccagcggctcttccaacacggtggaatcgggctga
ccacggccagatagcaacggccacgatagcgaccaggtcttcgagttcaacggcactcag
gcggtgagggttccggatggcgtggtttctgtcaaccctaaggagcccttcacgctttct
gtgtggatgaggcacgggccgttcagcaggaagaaggagacagttctctgcagttcagac
aagacagatatgaacaggcatcactattctttgtacatccacggctgccggcttgttttc
ctcctccgccaggatccttcggaggagaagaaatacaagccagcggaattccactggaag
ttgaatcaggtgtgtgacgaggagtggcatcactacgtgctcaacgtggagctcccgagc
gtgactctgtacgtggacggcgctgctcacgagcccttctccgtgactgaagactacccg
cttcacccgtccaggatagacactcagctcgtggtgggggcttgctggcaagagtattca
ggagttgaaagtgacaatgagaccgagcccgcgcctgtggcccctgcaggtggggacctg
cgcatgacccagtttttccgagggaacctggctggcctgacgatccgttccgggaagctg
gcggataagaaggtgatcgactgtctgtacacctgcaaagaggggctggacctgcagctc
cccgaggacagcggcgggggcgtgaagatccaggccagcccgggtcagtcggtgctgacc
ttggaaggggaggatgttggggagctggtcaaggccatgcagcacgtttcctacctgaac
tcacgccagttccccacacccgggatccggagactcaaaatcaccagcagggtcaagtgc
ttcaatgaggccccctgcgccgcagtctccccgctggacggctacgtgatggttctgcag
ccggaggagcccaagatcagcctgagtggcgtccaccatttcgctcgagcggcgtctgaa
tttgaaagtccggagggggttttcctcttccctgagctccgcatcatcagcaccatcacg
agggaagtggagcccgaaggcgatggggacgaggaccccacagtgcaagagtcgctggtg
tcggaggagatcgtgcacgacctggactcctgcgaggtcacagtggagggggaggagctg
aacccggagcaggagggcctggaggtggacacgggccgcctgcagcagaagcgcatcgaa
gtgagcagctccgacctgggtgtgatcttcacaggcgtggacaccatggccagctacgag
gaggccttacacctcctgcgctaccggaactggcacaccagggccttgctggaccggaag
ttcaagctcgtctgctcggagctcaatggccgctacgttagcaacgagttccaggtggag
gtgaacgtgatccacaccgccaaccccgtggagcatgccaaccacatggccgcccagccg
cagttcgtgcaccccgagcaccgctccttcgtcgacctgtcggggcacaacctggccaac
ccgcacccctttgcagtcgtccccagcacggccaccgtggtgatcgtggtgtgcgtcagc
ttcctggtcttcatgatcatcctgggggtgttccggatccgggccgcgcaccagcgcacc
ctgcgggaccaggacgccggcaaggagaacgagatggactgggacgactccgccttgacc
atcaccgtgaaccccatggagacgtacgaggaccagcacagcagcgaggaggaggaggag
gaggagcaggagagcgaggacggcgaggaggaggacgacatcaccagcgccgagtcggag
agcagcgaggaggaggagggcgagcacgggcgcccgcagaagggggcccggccgcagcag
ctggaatgggacgactccaccctcagctactga
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