Talpa occidentalis (Iberian mole): 119236583
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Entry
119236583 CDS
T07495
Symbol
ARID1A
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03082
ATP-dependent chromatin remodeling
tod04714
Thermogenesis
tod05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119236583 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119236583 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119236583 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tod03000
]
119236583 (ARID1A)
03021 Transcription machinery [BR:
tod03021
]
119236583 (ARID1A)
03036 Chromosome and associated proteins [BR:
tod03036
]
119236583 (ARID1A)
Transcription factors [BR:
tod03000
]
Eukaryotic type
Helix-turn-helix
ARID
119236583 (ARID1A)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119236583 (ARID1A)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119236583 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119236583
NCBI-ProteinID:
XP_037356417
LinkDB
All DBs
Position
Unknown
AA seq
2274 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEPPREEAGGEAAAXAAAERGEMKAAAGPESEGPA
AGPPPPPGKEPPDAAESNGGGGGGGPGAEPDLKNANGNAGPRPALNNNLAEPPGGGGGGS
SDGVGAPPHAAAAALPPPAYGFGQPYGRSPAAVAAAAAVFHQQHGGQQSPGLAALQSGGG
GAGLEPYAGPPQNSHDHGFPNHQYNSYYPNRSAYPPPXQAYALGSPRGGTPGSGAAAAAA
GSKPPPSSSASASSSSSTFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARG
YQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAASGGAQQRSHHAPMSPGSSGGGG
QPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYP
MTMQGRAQSTMGGLSYSQQLPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPS
QTSHAQTSYQQQPQSQPPQLQSSQPPYSQPSQPPHQQSPTPYPSQQSTTQQHPQSQPSYS
QPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQA
SSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGE
QSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQ
SDSIMHPSMNQSSIAQDRGYIQRNPQMPQYSSPQPGSALSPRQPSGGQMHTGMGSYQQNS
MGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQPGIPPYGT
LPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRP
PGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMAASPEMMGLGD
VKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTE
EKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSL
KKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSS
SMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQKRNSMTPNPGYQ
PSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVA
MGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQ
QQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQQQNYKRPMDGTYGPPAKRHEGEMY
SVPYSTGQGQPQQQQLPPAQPQPSSQQQAAQPSPQQDVYNQYGNAYPAAAAAATERRPAG
GPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYA
NRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVPPMTRPPP
SNYQPQPSMQNHIPQVSSPAPLPRPMENRTSPSKSSFLHSGMKMQKAGPPVPASHIAPAP
VQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALD
TINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGR
FSKASSPAPTEGEEGEDLLGTKLEEEEEEVVENDEEMAFSGKDKATPENSEEKLISKFDK
LPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPTRPH
VPCPPVTRKHVTTAEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTLAEEGTKSAE
ATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSL
SFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWD
CLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAV
LSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLL
ANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMM
RRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagccgccgcgggaggaggcggggggcgaggcggcggcgnng
gcggcggccgagcgcggggagatgaaggcggccgccgggccggagagcgagggccccgcc
gcggggccgccgccgccgccgggcaaggagccgccggacgcggccgagagcaacggcggc
ggcggcggcggcgggccgggcgcggagccggacctcaagaacgcgaacgggaacgcgggc
ccgaggcccgccctgaacaataacctcgcggagccgccgggcggcggcggcggcggcagc
agcgacggggtgggggcgcctccgcacgcggccgcggccgccctgccgccccccgcctac
ggcttcgggcagccctacggccggagcccggccgccgtcgccgccgcggccgccgtcttc
caccaacaacatggcggacaacaaagccctggcctggcagcgctgcagagcggcggcggc
ggcgcgggcctggagccctacgcggggcccccgcagaactcgcacgaccacggcttcccc
aaccaccagtacaactcctactaccccaaccgcagcgcctaccccccgcccncccaggcc
tacgcgctgggctccccgcgaggcggcactccgggctccggcgcggcggcggcggccgcg
ggctccaagccgcctccctcctccagcgcctccgcctcctcgtcgtcgtcgaccttcgcc
cagcagcgcttcggggccatggggggcggcggcccctccgccgccggcgggggcaccccc
cagcccaccgccactcccaccctcaaccagctgctcacgtcgcccagctccgcccggggc
taccagggctaccccgggggcgactacggcggcgggccccaggacgggggcgccggcaag
ggcccggcggacatggcctcgcagtgctggggggctgcggcggcggcggccgcctcggga
ggggcccaacaaaggagccaccacgcgcccatgagccccgggagcagcggcggcgggggg
cagccgctcgcccggaccccgcagccatccagtccgatggatcagatgggcaagatgaga
cctcagccatatggcgggactaacccatactcgcaacaacagggacctccatcaggacca
cagcaaggacatgggtacccagggcagccatatgggtcccagaccccgcagcggtacccg
atgaccatgcagggccgggcgcagagtaccatgggcggcctctcttattcacagcagctt
cctccctatggacaacaaggtcccagcgggtatggtcagcagggccagactccatattac
aaccagcaaagtcctcacccccagcagcagcagccaccctactcccagcaaccaccatcc
cagacctctcatgcccaaacttcgtatcagcagcagccacagtctcagccaccgcagctc
cagtcctctcagcctccatattcccagccatcccagcctccacatcagcagtccccaact
ccgtacccctcccagcagtccacaacccagcagcacccccagagccagccctcctactca
cagccgcaggcacagtctccctaccagcagcagcaacctcagcagccagcaccctcgacg
ctctcccagcaggctgcataccctcaaccccagtctcagcagtcacagcaaactgcctat
tctcagcagcgcttccctccaccacaggagttatctcaagattcatttgggtctcaggca
tcctcagccccttcaatgacctccagcaagggagggcaagaagatatgaacctgagtctt
cagtcaagaccctcgagcttgcctgatctttctggttcaatagatgatctccccatgggg
acagaaggagctctgagccctggagtgagcacatcagggatttcaagcagccaaggagag
cagagtaatccagctcagtctcctttctctcctcatacctcccctcacctacctggcatc
cgaggcccctccccgtcccctgttggctctcctgccagtgttgcgcagtctcgctcagga
ccactctcgcctgctgcagtgccaggtaaccagatgccacctcggccacccagtggccag
tcggacagcatcatgcatccttccatgaaccaatcgagcattgcccaagatcgaggttac
atccagaggaacccccagatgccccagtacagctcccctcagcccggctcggccttatct
ccacgtcagccttccggaggacagatgcacaccggcatgggctcctaccagcagaactcc
atggggagttacggtccccaggggagtcagtacggcccacaaggaggctaccctaggcag
ccaaattataatgccttgcccaacgctaactaccccagtgcaggcatggctggaagcatg
aaccctatgggtgctggcggtcagatgcatgggcagcctggcatcccaccttacggcaca
ctccctccagggagaatgagtcatgcctccatgggcaaccggccttatggccctaacatg
gccaatatgccacctcaggttgggtcagggatgtgtcccccaccagggggcatgaaccgg
aaaactcaagaaactgctgtcgccatgcatgttgctgccaactccatccaaaacaggcca
ccaggctaccccaatatgaatcaagggggcatgatgggcactggacctccctatggacaa
gggattaatagtatggctggcatgatcaaccctcagggaccaccatatcccatgggcgga
accatggccaacaattcagcagggatggcagccagcccagagatgatgggtctcggggat
gttaagttaactccagctaccaaaatgaacaacaaggcagatgggacacccaagacagaa
tccaaatccaagaaatccagttcttctactacaaccaatgagaagatcaccaagctatac
gagctgggtggtgagcctgagaggaagatgtgggtggaccgttacctggccttcacggag
gagaaggccatgggcatgacaaatctgcctgctgtgggtaggaaacctctggacctctat
cgcctctatgtgtctgtgaaggagattggtggcttgactcaggtcaacaagaacaaaaag
tggcgggaacttgcaaccaacctcaatgtgggcacctcaagtagtgctgccagttccttg
aaaaagcagtatatccagtgtctctatgcctttgagtgcaagatagaacggggagaagac
cctcccccagacatctttgcagctgccgattccaagaagtcacagcccaagatccagcct
ccctctcctgcgggatcagggtctatgcaggggccacagacacctcagtcaaccagcagt
tccatggcagaaggaggagacctgaagccaccaactccagcatccacaccacacagtcag
ataccccccttgccgggcatgagcaggagcaattcagttgggattcaggatgcctttcct
gatggaagtgaccccacattccagaagcggaattccatgactccaaaccctgggtaccag
cccagtatgaatacctctgacatgatggggcgcatgtcctatgagccaaataaggatcct
tatggcagcatgaggaaagctccagggagtgatcccttcatgtcctcagggcagggcccc
aacggcgggatgggggacccctacagccgagctgcaggccctgggctgggaaatgtggcg
atgggacctcgacagcactatccctatggaggtccttatgacagagtgaggacggagcct
ggaataggccctgagggaaacatgggcactggagccccacagccgaatctcatgccttcc
aacccagactctgggatgtattctcctagccgctaccccccgcagcagcagcagcagcag
cagcagcaacgacatgattcctatggcaatcagttttccactcaaggcaccccttccggc
agccccttccccagccagcagaccacaatgtatcagcagcagcagcagcagcagaattac
aagcggccaatggatggcacatatggtcctcctgccaagaggcatgaaggggagatgtac
agcgtgccatatagcacagggcaggggcagccccagcagcagcagctgcccccagcccag
ccccagccctccagccagcaacaagctgcccagccttcccctcagcaagatgtgtacaac
cagtatggcaacgcctatcctgctgctgccgctgccgctactgagcgccgaccagcaggc
ggcccccagaaccagtttccattccagtttggccgagaccgtgtctctgcaccccctggc
tctaatgcccagcagaatatgccaccacaaatgatgggcggccccatacaggcatcagct
gaggttgctcaacaaggcaccatgtggcaggggcgtaatgacatgacctacaattatgcc
aataggcagagcacaggctctgccccccagggccctgcctatcatggcgtgaaccgaaca
gatgaaatgctgcacacggatcagagggccaaccatgaaggcccatggccttcccatggc
acgcgccagcctccatatggtccttctgcccctgtgccccccatgacaaggccccctcca
tccaactaccagccccagccaagcatgcagaatcacattcctcaggtatcgagccccgct
cccctgccccggccaatggagaaccgcacctctcctagcaagtcttcattcctgcactct
gggatgaagatgcagaaggcaggccctccagtacctgcctcacatattgcacctgcaccc
gtgcaacccccaatgattagacgggacatcaccttcccacctggctctgttgaagccaca
caacctgtgttgaagcagaggaggcggctcacaatgaaagacattggaaccccagaggca
tggcgggtaatgatgtccctcaagtctgggctgctggcagagagcacgtgggcactagac
accattaacattctgctatatgatgacaacagcatcatgaccttcaacctcagtcagctc
ccagggttgctagagctccttgtggaatatttccgacgttgcctgattgagatctttggc
attttaaaggagtatgaggtgggtgacccaggtcagagaacactactggaccctgggaga
ttcagcaaggcatctagtccagcccccactgagggggaggagggggaagaccttctaggg
actaaactagaagaggaggaagaagaagtagttgaaaatgatgaggagatggccttttcg
ggcaaggataaggcaacgccagagaatagtgaggagaaattgatcagtaagtttgacaag
cttccagtcaagatcgtgcagaagaacgacccgtttgtggtggactgctcagataagctt
gggcgcgtgcaggagtttgacagcggcctgctgcactggcggattggtgggggggacacc
actgagcatatccagacccactttgagagcaagacagagctgctgcctacccggcctcat
gtgccctgcccaccagtcacccggaaacatgtcacaacagcagagggtacaccagggaca
acagagcaggagggccccccacctgatggccctccagaaaaacggatcacagccactatg
gatgacatgttgtccacccggtctagtacattggctgaggagggaactaagagtgcagaa
gccaccaaggagagcagcaagtttccattcggcatcagcccggcacagagccaccggaac
atcaagatcttagaggacgaaccccacagtaaagatgagaccccactgtgtacccttctg
gattggcaggattcccttgccaagcgctgcgtctgtgtctccaataccatccgaagcctg
tcgtttgtaccaggcaacgactttgagatgtccaaacacccggggctgctgctgatcctg
ggcaagctgatcctgctgcaccacaagcacccagagcggaagcaggcgccgctaacttac
gagaaggaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggac
tgcttggagatgctccgggaaaacaccttggtcacgctcgccaacatctcggggcagttg
gacctctccccgtaccccgagagcatctgcctccctgtcctggacggactcctccactgg
gcggtctgcccttcagccgaagcccaggaccccttctccaccctgggccccaatgctgtc
ctctccccccagagactggtcttggaaaccctcagcaaactcagcatccaggacaacaat
gtggacctgatcctggccacgccccccttcagccgcctggagaagttgtatagcaccatg
gtgcgcttcctcagtgaccgaaagaacccggtatgccgggagatggccgtggtactgctg
gccaacttggcgcagggcgacagcctggcagcccgggccatcgcagtgcagaagggcagc
atcggcaacctcttgggcttcctggaggacagcctcgctgccacgcagttccagcagagc
caggccagcctgcttcacatgcagaacccgccctttgagccaactagcgtggacatgatg
cggcgggctgcccgtgcgctgctggccctggccaaagtggacgagaaccactcagagttc
acgctgtacgagtcgcggctgttggacatctcggtatcgcccttgatgaactcgttggtt
tcacaagtcatttgtgatgtactatttttgattggccagtcatga
DBGET
integrated database retrieval system
