Talpa occidentalis (Iberian mole): 119237569
Help
Entry
119237569 CDS
T07495
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tod04040
]
119237569 (SCN11A)
Ion channels [BR:
tod04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119237569 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
119237569
NCBI-ProteinID:
XP_054549163
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MISGFMMNPFTEGGEGTRVKMDDRCYPVIFPDARNFRPFTADSLDAIKKRIAIQKEKKKS
KGQTAAEPLPRPQLDLKASRKLPKLYGDIPHELISKPLEDLDPFYRTHQTFMVLNKKRTI
YRFSAKRALFIFGPFNSVRSLAIKISVHSLFSLFIICTVVINCVFMASALGKDGSNETAN
TAEYVFTGIYIFEALIKILARGLVLDEFSFLRDPWNWLDSIVIATAFASYVPNLTFSLSS
LRTFRVFRALKAISVISGLKVIVGALLRSVKKLVNVMILTLFCLSIFALVGQQLFMGTLN
HRCVREDCHNVTDDNKENCLEKKNASSDFIMCYTGNTNRSSACSLGYVCKRTNYNPDNGF
TNFDNFGWSFLAMFRLMTQDSWEKLYQQVLHTSGCYSVFFFVVVIFLGSFYLINLTLAVV
TMAYEEQNRNVAAETEAKEKMFQEAQKLLKEEKEALVAMGIDRSSLNSLEASSFSPKKKK
LFGKKRKSFFLRESGKDQVPGSDSDEDSPKKPPLLEQTKRLSQNLSVDYPDELGDPFQRQ
RALSAVSILTITMREQEKSQEPCLPCGANLASKYLVWDCSPQWLSIKKALRIVMTDPFTE
LVITICIIINTLFLAMEHNTMDDNFTKMLETGNWVFTAIFLAEMGLKIIALDPYHYFRRG
WNIFDCIVALLSFADVICHFVVPGGKSYFRSLRVLRVFKLAKSWPTLNTLIKIIGHSVGA
LGNLTVVLTIVVFIFSVVSMQLFGSRFNDKKDIKQCSAGYNSTSLCLRRWHMGDFYHSFL
VVFRILCGEWIENMWECMAVAQMPLCIIVFLSIMVIGKLVVLNLFIALLLNSFSNEERGE
NRDGETRKTKVQLALDRFHWAFCFVIKTLEHFCCKRCRKQNLSKQKEVTGDPDVENKDVI
PPKNFDQPAPKTLNVGHDWIHLAPLAEEECDVLSLSETNLPSSAQPDAGEQIYEFHPDTR
KTTSPGVQSVEINVFSEDDASVAIQDPQKKFDATSVYSECSTVDLQNPFGQVLEMVPKKQ
PGRCLPKGLRLCFPWCSMNRSNSPWVIWWNMRKTCYQIVKHSWFESFIIFVILLSSGALV
FEDVNLHKQVKIQQLLNCTDIIFTYIFILEMGLKWVAFGFLKYFSSAWCWLDFIIVIVSV
PSLTNLIQLKPLRILRALRPLRALSQFEGMKVVVYALLGAIPAILNVLLVCLIFWLIFCI
LGMNLFSGHFGKCFDPTNSNLEINYSIVDNRNQCKSKNLSWVIHEVNFDNVGMAYLALLQ
VATFKGWMEIMYAAVDSRGKDKQPHFEENKYMYIYFIVFIIFGSFFTLNLFIGVIIDNFN
QQQKKLGGQDIFLTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTSQFFDVII
ISFILLNMVFMMAESHDQSDHVESTLEHLNLAFVVIFTFECLIKIFALRQFYFTNGWNLF
DCVVVVLSIVSSIVTALGKKHIPFPPTLLRIIRLARIGRILRLVRAARGIRTLLFALMMS
LPSLFNIGLLLFLIMFIYAIFGMKCFSDVKLEAGVDDIFNFQTFVGSMLCLFQITTSAGW
DSLLRPMLREGTPECNPEIQNCSRSAIATAYFVSYIIISFLIVVNMYIAVILENFNTATE
ESEDPLSEDDFEIFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNRFQFLVMDL
PMVDGDRLHCMDILFAFTARVLGDSSGLDSMKAMMEEKFMEANPFKKLYEPIITTTKRKE
EERCAAVIQKAFRNHRVKVTRCLLEGRPQAALQTLCNGDLPSSGVTEGKVHYD
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgatttctggtttcatgatgaatccatttactgaaggaggtgaaggtaccagggtaaag
atggatgacaggtgctacccagtgatcttcccagatgcacggaatttccgccccttcact
gctgactccctggatgcaattaagaagcgtattgccatccagaaggagaaaaagaaatcc
aaaggccagacggcagcagaacccctgcctagacctcagcttgatctgaaggcttccagg
aagttgcctaagctttatggggacattccccatgaactgatatcaaaacccctggaagac
ttggacccattctacagaactcatcagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagcgccaagcgtgccttgttcatttttggccctttcaattctgttagaagt
ttagccattaaaatttcagtgcattcattgttcagcttgttcatcatctgcaccgtcgtc
atcaactgcgtgttcatggcctcagctcttggaaaggatggtagtaacgaaacagccaac
accgctgagtatgtcttcaccgggatttatatttttgaagctttgataaagatattggca
agaggtcttgttctggatgagttttctttccttcgagatccatggaattggctggactcc
attgtcattgcaacagcgtttgcatcatatgtgccaaatctcacattcagcctgtcatcc
ctgcgtaccttccgggtgtttagagctttgaaagcaatttctgtaatttcaggcctgaag
gtcattgttggtgccttgttgcgctctgtgaagaagcttgtcaatgtgatgatcctgact
ctcttttgcctgagcatctttgctctggtagggcagcagctcttcatgggaactttgaat
catagatgtgtcagagaggactgccacaatgttactgacgacaataaagagaactgcctt
gaaaaaaaaaatgcttcaagtgatttcataatgtgttacaccgggaatactaaccggtct
agtgcctgttctttgggatatgtatgcaaaaggacaaattataatcctgacaatggtttt
acgaattttgacaactttggctggtcttttcttgccatgttccggcttatgactcaagat
tcctgggagaaactttatcagcaggtcttgcatacatctgggtgctactctgtcttcttc
tttgtggtggtcatcttcctgggctctttctacctgattaacttaaccctggctgttgtt
accatggcttatgaagaacagaacaggaatgtagctgctgagacagaggccaaggagaag
atgttccaggaagcccagaagctgttaaaggaggagaaggaggctttggttgctatggga
attgacagaagttcacttaattcccttgaagcatcatctttttccccaaagaagaaaaag
ttgtttggcaagaaaaggaagtccttctttttgcgagagtctgggaaggaccaggttcca
ggatcagattctgatgaagattcccccaaaaagccacccctcctagagcaaaccaaacga
ctctctcagaacttgtcagtggactaccctgatgagcttggagaccctttccaaagacag
agggcattgagtgctgtcagcatcctcaccatcaccatgcgtgaacaagaaaaatcacag
gaaccttgtctcccatgtggggcaaacctggcctccaaatacctcgtgtgggactgtagc
ccccagtggctatccattaagaaggctctgagaattgtgatgactgaccccttcactgag
ctggtcatcaccatctgcatcataatcaacactctcttcttggccatggaacataacacg
atggatgacaattttacgaaaatgttggaaacagggaattgggttttcactgccattttt
ttggcagaaatgggcctaaaaatcatcgcacttgatccctatcactactttcgccgaggc
tggaatatttttgactgcattgttgctcttctgagttttgcagatgtgatttgccacttt
gttgtgcctggaggaaagtcatacttccgttctctaagagtgctgagagtcttcaagtta
gccaaatcctggccaactttaaacacattgattaagataattggccactccgttggagct
cttggaaacctgactgtggtcctgaccattgtggtctttattttctctgtagtcagcatg
cagctttttggctcccggttcaatgacaagaaggatataaaacaatgcagtgctggctat
aactctacaagcttatgtttaagacgctggcacatgggagatttctaccattccttcctg
gtggtattccgcatcctctgtggggaatggatcgaaaatatgtgggaatgtatggcagta
gctcaaatgccactgtgcattattgtctttctttccatcatggtgataggaaaacttgtg
gtactcaacctcttcattgccttgctgctcaattccttcagcaatgaggagagaggggaa
aacagggatggagaaacccgtaaaaccaaagtccaattagctctggatcgcttccattgg
gctttttgttttgtgataaagactcttgagcatttttgttgcaagcggtgcaggaagcaa
aatttgtcaaagcaaaaagaggtgacaggagaccctgatgtagaaaacaaagacgtcatt
cccccaaagaactttgatcagcctgcaccaaagactttgaatgtcgggcatgattggatt
catttggctccacttgcggaggaagaatgtgatgttctatctcttagtgaaactaatcta
ccatctagtgcacaacctgatgctggagaacagatctatgaattccatccagataccaga
aagaccaccagtccaggagttcaaagtgtggaaattaatgtgttctctgaagatgatgct
tctgtggcaatacaggatccccaaaagaagtttgatgctaccagtgtatattcagaatgt
agtactgttgatctacagaatccctttggacaggtgcttgaaatggttcccaaaaagcaa
ccagggagatgtttgcccaaaggcctgcgtctctgctttccatggtgttccatgaataga
agcaactccccctgggtcatttggtggaatatgcggaaaacctgctaccaaatagtgaaa
cacagctggtttgagagttttattatctttgtgattctgctgagcagtggtgcactggta
tttgaagatgttaatctccacaaacaagtgaaaatccaacaattacttaattgtactgat
attattttcacgtacatttttatcctggagatgggtctgaagtgggtggcatttggattt
ctgaagtatttctccagtgcctggtgctggctggatttcatcattgtgattgtctctgtg
cccagtctcaccaacttaattcaacttaagcccttgcggattctacgagcactaaggccc
ctccgagcactgtcccagtttgaaggaatgaaggtggtggtctatgctctcctcggtgcc
atacctgccattttgaatgttttacttgtctgcctcattttctggctcattttttgtatc
ctgggaatgaacttattttctggacattttggaaaatgctttgatccaacaaatagcaac
ttagagataaattacagcattgttgacaaccgaaaccaatgtaaaagtaaaaatttgtcc
tgggtaatccacgaagtcaactttgacaatgtaggaatggcttacctggccctgctgcaa
gtggcaacatttaaaggttggatggaaattatgtatgcagctgtcgattccagagggaaa
gataaacaaccacattttgaggagaataaatacatgtacatttacttcatagtttttatc
atctttggctcattcttcactctgaacctctttattggtgttattattgacaacttcaac
caacagcagaaaaagttaggtggccaagatatttttttgacagaagaacagaagaaatac
tataatgcaatgaaaaaactgggatccaaaaaacctcaaaagccaatcccaagacctctg
aacaaattccagggttttgtgttcgacatcgtgacaagccaattctttgacgtcatcatc
atcagcttcattctcctcaacatggttttcatgatggctgagtcacatgatcagtctgac
catgtagaatccacccttgagcatctcaacctggcctttgtggtcatctttacatttgag
tgcctcatcaaaatctttgctttgaggcaattctacttcaccaatggctggaatttattt
gattgtgtggttgtggtcctctctattgttagttcaatagttactgccttgggaaagaag
cacattccctttcctccgacgctcctcagaattatccgcttggcccggattggccgaatc
ctaagactcgttcgggcagctcgaggaatcaggacgctcctttttgctctgatgatgtca
cttccttctctgttcaacattggccttctcctctttctgataatgtttatctatgccatt
tttggtatgaaatgctttagtgatgtgaagttagaggctggcgttgatgacatattcaac
ttccaaacttttgttggtagcatgctctgtctcttccagataaccacatctgcaggctgg
gacagtctcctcagacccatgttgcgagaaggcacgcctgaatgtaaccccgaaattcag
aactgtagccgctctgccatagccacagcctacttcgtcagctacatcatcatctccttt
ctcattgttgtcaatatgtatattgctgtgattctggaaaacttcaatacagccactgaa
gaaagtgaggaccctttgagtgaagatgactttgaaatattctatgaagtttgggaaaag
tttgacccggaagcaacacagtttatcaaatattctgccctttctgattttgctgatgcc
cttcctgaacctttgcgtgtggcaaagccaaatagatttcaatttctagtaatggacttg
cccatggtggatggagatcgcctccactgcatggatattctctttgctttcaccgcaagg
gtactcggggactccagtggcctggatagcatgaaagcaatgatggaagagaagttcatg
gaggccaaccctttcaagaagttatatgaacccataatcaccaccacgaagaggaaggaa
gaggaaagatgtgctgctgttattcaaaaggcatttcgaaatcacagggtgaaagtgacc
aggtgtctgttggaaggcagacctcaagccgctctccagactctctgcaatggagacttg
cccagctccggggtaactgagggcaaggtccactatgactga
DBGET
integrated database retrieval system
