Talpa occidentalis (Iberian mole): 119238527
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Entry
119238527 CDS
T07495
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod04140
Autophagy - animal
tod04142
Lysosome biogenesis
tod04148
Efferocytosis
tod05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119238527 (VPS39)
04140 Autophagy - animal
119238527 (VPS39)
04148 Efferocytosis
119238527 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119238527 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tod04131
]
119238527 (VPS39)
Membrane trafficking [BR:
tod04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119238527 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
VPS18_solenoid_2nd
LIF1_N
DUF4145
Beta-prop_WDR36-Utp21_1st
Lgl_C
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
119238527
NCBI-ProteinID:
XP_037358181
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLQMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCGNSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPADYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLRIFTEDLPEVEALPRDRVLGFLVENFKGLAVPYLEHVIHVW
EETGSSFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGDEEGELGEYRRKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINEIRIFLEKVLEENAQKKRFNQILKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagcccgtgccgatcctagaaaagctgcctctgcagatcgactgc
ctggctgcttgggaggaatggcttctcgttggaaccaaacaaggacatcttcttctatat
aggattcggaaggacgttggctgcaacaggtttgaagtgacactagagaaatccaataag
aacttctccaaaaagattcagcagatccatgtggtttcccagtttaaaattctggtcagc
ttgttagaaaacaacatttatgtccatgacctattgacatttcaacaaatcactacagtt
tcaaaggcaaaaggagcatcactcttcacatgtgacctccagcacacagagactggtgag
gaggtgttgcaaatgtgtgtggctgtgaaaaagaagctgcaactctatttctggaaagac
agagaatttcatgaactgcagggggactttagtgtgccagatgtgcccaagtccatggca
tggtgtggaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagcccttagttgca
cccctggcagatggaaaagtggcggtgggtcaggatgatctcaccgtggtgctcaatgag
gaaggaatctgcacacagaaatgtgccctgaactggacagacatacctgtggccatggag
caccagcctccctacatcattgcagtgttgcctcgatatgtggagatccgaacatttgag
ccaaggcttctggtccagagcattgaattgcaaaggccccgctttattacctcaggagga
tcaaacatcatctatgtcgccagcaatcattttgtttggagacttattcctgttcccatg
gcaacccagatccaacagcttctccaggacaagcagtttgaattggctctgcagctcgct
gaaatgaaagatgattccgacagtgaaaagcagcaacagatccatcacatcaagaacttg
tatgccttcaatctcttttgccagaagcgttttgatgagtccatgcaggtctttgctaaa
ctgggcacagatcctacccacgtgatgggcctgtacccagacctgctgcccgcagactac
aggaagcagctgcagtatccaaacccactgcctgtgctctcaggggctgagctggagaag
gctcacttagctctgattgactacctgacacagaaacgaagccagttggtaaagaagctg
aatgactccgatcaccagtccagcacctccccgctcatggaaggcactcctactatcaaa
tccaagaagaagttgttgcaaatcattgacacgaccctgctcaagtgctacctccatacc
aatgtggctctggtggcccccttgctgcgcctggagaataatcactgccacatcgaagaa
agtgagcatgtgctgaagaaggctcataagtacagtgaactgatcatcctgtatgagaag
aaggggctccatgagaaagctctgcaggtgctggtggaccagtccaagaaagcgaactcc
cctctgaaaggccatgagaggacagtgcagtacctgcaacatctgggcacagaaaatctg
cacctgattttttcctactcagtgtgggtcttgagagacttcccggaggatggcctgagg
atatttactgaagatctcccagaggtggaggccctcccacgagaccgagtgctcggcttc
ttagtagagaattttaagggtctggctgttccttatctggaacacgtcatccacgtttgg
gaggagacgggctcttcgttccacaactgcctgatccagctgtactgtgagaaggtgcaa
ggtctcatgaaggagtatctcctgtcctttcctgcagggaaaactccagtccctgctgga
gacgaagagggtgagctgggagaataccgacggaaactcctcatgttcttggaaatttcc
agctactatgatccaggacggctcatctgtgacttcccttttgatggcctcttagaagaa
cgtgccctcctgctgggacgcatggggaagcatgagcaagcgctcttcatctatgtccac
atcctgaaggatacaaggatggctgaggagtattgccacaagcattacgaccaaaacaaa
gatggcaacaaagatgtatatctgtccctgctgcggatgtacctgtcgccccccagcgtt
cactgcctggggccaatcaagctagaactgctggagccacaagccaacctccaggccgcc
ctgcaggtcctcgagctgcaccacagcaaactggacacgaccaaggccatcaaccttctg
ccagcaaacactcagattaatgaaatacgcatctttctggagaaggttttggaagaaaat
gcacaaaagaaacggttcaatcaaatactcaagaaccttctccatgcggagttcctgcgg
gtccaggaagaacggattttacaccagcaggtgaagtgcatcatcacggaggagaaggtg
tgcatggtgtgcaagaagaagattggaaacagtgcatttgcaagataccccaacggagtg
gtcgtgcactacttctgttccaaagaggtaaacccggctgatacctga
DBGET
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