Talpa occidentalis (Iberian mole): 119239287
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Entry
119239287 CDS
T07495
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X2
KO
K26109
nuclear exosome regulator NRDE2
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119239287 (NRDE2)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119239287 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
TPR_2
DUF2201_N
DUF4778
Motif
Other DBs
NCBI-GeneID:
119239287
NCBI-ProteinID:
XP_037359611
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MALFPAFAAVSEAPDSGSARKELDWLSNPSFCVGTIASLSPQTEEATAPVLEGSLLTRSP
LKSEPSDESDFNKKFKQASRKKKKEKKKKRKHQHHKKTKRKRGQSSCSGSEPDTDSEKGK
SSRSTQDSKKESEKLNQENNAAADVGHRFVWLEDVQALTGETFRTDKKPDPANWEYKSLY
RGDIARYKRKGDSCLGINPKKQCISWEGAPTEKRRSHRHVERYFTKKSVGLLSIDGVAIS
STAEPPSSEPVSFIPVKDSDDVGPPVTTWLNPLGIYDQSTTQWLQGQGPSEQELKQPDAQ
PDRESALLKAKVEEFNRKVRENPRDIQLWMAFVDFQDEVMRSPGLYAIEEGEQEKRRRSL
RLTLEKKLAILERAIESNQSSVDLKLAKLKLCSEFWEPSTLVKEWQKLIFLHPNNTALWQ
KYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFALFLQQCHF
LRQAGHAEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAGEKGARGWR
AWMHQQERGGWVIITPDEDDDEPEDEDQEIRDKTLPKWQIWLAAERSRDQRHWRPWRPDK
AKKQTEEDCEDPERQVLFDDIGQSLIRLCSRDLQFQLVMAFLQFLGVPSGFSPPASCLYL
AMDESSIFDSGLYDEKPLTSLSLSFSGVSCVGRTDPLGCRRWTRGHNREGEEFIRNLFHL
VMPLFSGRESSQLCFSWLRYELAKVVWCLRTKNKKRLKSQGKNCKKLAKNLLKEPENRNN
FCLWKQYAHLEWLLGNTEDARKVFDTALSLAGGRGLKDCELAELSLLYAELEAELLPDAG
RAATARAVHILTRLTESGPYGSYAGQVMAVHILKARKAYEHALQDCLGEGSASDPAPCSS
DPAPSGSDPAPSSSSSRLVSVAKCFMLFQYLTVGIDAAVRVYEQVFAKLKDSVSPEDRDL
VASASPPSLSRDLEPLTLLHTSLLRFHMTVSVYPLAPLREALSEALKLYPDNQLLWRSYV
QIQNKSHSASKTRRFFDAIIRSAKPLEPWLFAIEAEKMRKRLVETVQRVDGKEVYATIPE
TGLTHRIRGLFENAMRSEHASQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVL
YMDAVEHFPDEMQEILDLMTEKELRVRLPVEELELLLED
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcggccgttagtgaggctcccgatagcgggagcgccagg
aaagaactagactggctgagcaacccaagcttttgtgttggaaccatagcatctctgagc
ccacaaactgaagaggccacagcccctgttttggaggggtcgctgctgacaagaagtcct
ctgaaatcagagccttcagatgaaagtgactttaacaaaaagttcaaacaagcaagccga
aaaaagaagaaagagaagaagaaaaaacggaagcatcagcatcataagaagaccaagaga
aaacgtgggcagtcgagctgcagtggatctgagccagatactgactctgaaaagggcaaa
tcttccaggagcactcaagacagtaaaaaagaatcagagaaattgaatcaggaaaacaat
gctgctgctgatgttggccatcgctttgtttggcttgaggacgtccaggctctgacagga
gaaaccttcagaacagataagaaaccggatcctgcaaactgggagtataagtccctctac
cggggagacatagcgagatacaagaggaaaggagactcctgccttggcattaaccctaag
aagcagtgcatatcttgggagggggctcccacagagaagaggcgctcgcacaggcatgtg
gagcgctactttacgaagaagagcgtgggcttgctgagcatcgacggggttgccatcagc
agcacagcagagccgccctcctcggagccagtctcgttcatcccggtgaaggattcggac
gatgtgggtccccccgttacaacctggctgaatcctctgggcatctatgatcagtccacc
acacagtggttacaaggacagggtccttcagagcaggagctgaagcagccggacgcacag
ccagacagggagagtgcgcttctcaaggctaaggtggaggagttcaacaggaaggttcgg
gaaaatcctcgggacatccagctatggatggcatttgttgattttcaggacgaggtcatg
agaagtcctggcctgtatgccatcgaggagggtgagcaggagaagcgcaggaggtcgctg
aggctgactctggagaagaagctggccattctggaacgggccatcgaaagcaaccagagc
agtgtggatctgaagctcgccaagctgaagctctgctccgagttctgggagccttcaacg
ctggttaaggagtggcagaaactgatatttttacaccccaacaatactgccctttggcag
aagtaccttttattttgccagagccagtttagcaccttttccatatccaaaatccacagc
ctgtacgggaagtgtttgagcaccctgtccgccgtcaaggatggcagcatcttgtctcac
cccgccctgcccggcaccgaggaggccatgtttgcgctcttcctgcagcagtgccacttc
ttgcggcaggctggtcatgcggagaaggcggtctccttgttccaggccatggttgacttc
accttcttcaaacccgacagtgtgaaagatctgcccaccaaaggacaggtggaattcttt
gagcccttttgggacagtggagagccccgggctggggagaagggtgcccgaggctggaga
gcgtggatgcaccagcaggagcgcggtggctgggtgatcatcactccagatgaggatgac
gatgaaccagaagatgaagaccaggaaatcagagataagacactgcccaagtggcagatc
tggctcgcagctgagcggtcccgagaccagaggcactggcggccgtggcgccctgataaa
gccaagaagcagactgaggaagactgtgaggatccagagagacaggtgctgtttgatgac
attggacaatccctgatcagactctgcagccgggatctgcagtttcagctggtcatggcc
ttcctacagttcctgggcgtgccctctggcttcagccccccggcctcctgcctctatctg
gccatggacgagagcagcatctttgatagtggactttacgatgaaaagccattgacttct
ctcagcctttcgttttccggcgtcagctgtgtgggccgcacggacccactgggctgccgg
cgctggaccaggggtcacaatcgagaaggcgaggagttcatccgcaacctcttccacctt
gtgatgcctttgttttcaggcagagagagttctcagctctgtttctcctggttgcggtac
gagcttgcaaaggtcgtttggtgcctgcgcactaaaaacaagaagagattaaagtcacaa
ggaaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaatcgtaacaat
ttttgcctctggaagcagtacgcacatctggagtggttgctgggcaacacagaggatgcc
aggaaagtttttgacacagcgctcagcctggcggggggcagagggctgaaggactgcgag
ctcgctgagctcagtctcctctacgcggagctggaggcggagctgctgcccgacgcaggc
agggccgccacggcccgagctgtccacatactgaccaggctgacggagagcggcccctac
gggtcctacgccggccaggtcatggccgtgcacattttgaaagcccggaaggcttacgag
cacgcactgcaggactgtctgggcgagggctctgcctctgacccggctccctgcagctcc
gacccggcacccagtggctccgatcccgctcccagcagctcctctagccgcctagttagt
gtggccaagtgctttatgctcttccagtatttgaccgtaggcatagatgctgctgtgcgt
gtgtatgagcaagtgtttgccaaactgaaggactcagtttcccccgaagaccgtgacctg
gtggcgagtgccagccccccgagtctaagccgtgacctggaacccctcacgctgctgcac
acgagcctgctccgcttccacatgaccgtcagcgtgtacccgctggcgccgctgcgtgag
gcgctctcagaggctttaaagttgtatccggacaaccagcttctttggaggtcttatgta
cagattcaaaataagtcccacagtgccagtaagaccagaagattctttgatgccatcatc
aggtctgccaaacccttggagccgtggttgtttgctattgaagccgagaaaatgaggaaa
agactggtggaaacggttcagagggtcgatggtaaagaggtctatgccacaattcccgag
accggcctaacacaccggatccgaggcctgtttgaaaacgccatgcggagcgagcatgcc
agccagtgccccctgctgtggaggatgtacctgaattttttggtttccttaggaaataaa
gaaagaagcaaaggtgtgttctacaaagcgcttcagaattgtccctgggcaaaggtgttg
tacatggacgctgtggagcacttccctgacgagatgcaggagatcctggacctgatgacc
gagaaggagctacgggtgcgcctgccagtggaggagctggagcttctgcttgaggactag
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