Talpa occidentalis (Iberian mole): 119240485
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Entry
119240485 CDS
T07495
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119240485 (PTBP1)
03041 Spliceosome [BR:
tod03041
]
119240485 (PTBP1)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119240485 (PTBP1)
Spliceosome [BR:
tod03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119240485 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119240485
NCBI-ProteinID:
XP_037360813
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDNRSAGVPSRV
IHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIMSASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGT
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHL
NGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSISEEDLKVLFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcccagatatagcagttggtaccaagcggggatctgacgagcttttc
tctacctgtgtaactaacggaccctttatcatgagcagcaactcggcttccgcagcaaat
ggaaatgacagcaagaagttcaaaggtgacaacagaagtgccggcgtgccctccagagtg
atccatatccggaagctccccagcgacgtcaccgagggcgaggttatctctctgggactg
cccttcgggaaagtcaccaacctcctgatgctgaaaggaaagaaccaggccttcatcgag
atgaacacggaggaggcggccaacaccatggtgaactactacacgtctgtgacgcccgtg
ctgcgtggccagcccatttacatccagttctccaaccacaaggagctcaagacggacagc
tcccccaaccaggcgcgagcccaggcagccctgcaggccgtgaactcagtccagtctgga
aacctggccctggctgcctccgctgctgcagtggacgctgggatggcgatggctggccag
agcccggtgctcaggatcatcgtggagaaccttttctacccggtgaccctggatgtgctg
caccagatcttttctaagtttggcacagttttaaaaatcatcactttcaccaagaacaac
cagttccaggcattgctgcagtatgctgaccctgtgagcgcccaacatgccaagctgtct
ctggatgggcagaacatctacaatgcctgctgcactctccgcattgacttctccaagctc
accagcctcaatgtcaagtataacaatgataagagtcgtgactatacacgtccagacttg
ccatctggggacagccagccctcactggaccagactatggccgcagcctttggtgcgcct
ggtataatgtcagcctctccgtatgcaggagctggtttccctcccacctttgcaattcct
caagctgcaggcctctctgttcctaacgtgcacggagccctggcccctctggccatccca
tcggcggcggcggcggcggcagcggcgggcaggatcgccatcccaggcctggcggggaca
ggaaattctgtcctgctggtcagcaatctcaaccccgagagagtcacaccccaaagcctc
tttattcttttcggcgtttacggtgacgtgcagcgtgtgaagatcttgttcaataagaag
gagaacgccctggtgcaaatggctgatggcagccaggcccagctggccatgagccacctc
aatgggcacaagctgcatgggaagccagtgcgcatcacactgtccaagcaccagaacgtg
cagctcccccgagagggccaggaggaccagggcctcaccaaggactacggcaactcgccc
ctgcaccgcttcaagaagcctggctccaagaacttccagaacatcttcccgccctcggcc
accctgcacctctccaacatcccgccctccatatctgaggaggacctcaaggttctcttc
tccagcaacggtgggatcgtcaaagggttcaagttcttccagaaggaccgcaagatggcg
ttgattcagatgggctccgtggaggaggccatccaggccctcattgacctgcacaaccac
gacctgggcgagaaccaccacctgcgcgtgtccttctccaagtccaccatctag
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