Talpa occidentalis (Iberian mole): 119240511
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Entry
119240511 CDS
T07495
Symbol
MEX3D
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119240511 (MEX3D)
04121 Ubiquitin system [BR:
tod04121
]
119240511 (MEX3D)
Enzymes [BR:
tod01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119240511 (MEX3D)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119240511 (MEX3D)
Ubiquitin system [BR:
tod04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119240511 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-RING_4
RING_XB3-XBAT31
zf-C3HC4
KH_DEAH11_2nd
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119240511
NCBI-ProteinID:
XP_054548998
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MPGSVGQPDGDGGGPGGGGPXGAAAGDPSPGTPPPPPPEGAEEAAPAPRPPPEPDDAAAA
LRLALDQLSVLGLGGAGGAREAAAGGGDGAAAGGADGGAAEPAPPDGPEAGAPGAAAALS
LLEPAASPPPPPPPRPSPPDVFAGFAPHPAALGPPTLLAEQMSVIGSRKKSVNMTECVPV
PSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAE
HFSVIRATRSKAGGLPGSAQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHT
YIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDAGPDSDFHANGTDVCLDL
LGAAASLWAKAPNPGRRPPAAAAGLRGDSALGAPXGPEAFYAGSRAGPPVPDAGPASPYG
GAGNGGFTFSGDGPGTPAGPPAPEDCDFGFDFLALDLTVPAAATIWAPFERAAPLPAFSG
CSAVNGAPAPPAPGARRNSGAGTPRHSPTLPEPGALGLELPLARRGAPDLGGALPWRPAQ
GALAAFSSGAGFSAATSLPSGSAASPCSPLDSSAPDGGRKPAAPAAPAPAPALARECVVC
AEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIFS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccgtgggccagcccgacggcgacgggggcggcccgggagggggcggcccc
nggggggcggccgcgggggaccccagcccggggaccccgccgccgcccccgcccgagggc
gccgaggaggccgccccggcgccccggccgccgccggagcccgacgacgcggccgccgcg
ctgcgcctggcgctggaccagctctccgtgctggggctggggggcgcgggcggcgcgcgg
gaggcggcggcgggcggcggggacggcgcggcggcggggggcgcggacggcggggcggcg
gagcccgcgccccccgacgggcccgaggcgggcgcccccggggccgcggccgcgctgtcg
ctgctggagcccgccgcgagccccccgcccccgccgccgccccggccgtcgccgcccgac
gtgttcgcgggcttcgcgccccacccggcggccctgggccccccgacgctgctggccgag
cagatgagcgtgatcggcagccgcaagaagagcgtgaacatgaccgagtgcgtgccggtg
cccagctcggagcacgtcgccgagatcgtggggcgccagggctgcaagatcaaggctctg
cgggccaagacgaacacgtacatcaagacgccggtgcgcggggaggagccggtcttcatc
gtgacgggccgcaaggaggacgtggagatggccaagcgcgagatcctgtcggccgccgag
cacttctccgtgatccgcgccacgcgcagcaaggccgggggcctgcccggctcggcccag
ggcccgcccaacctgccgggccagaccaccatccaggtgcgcgtgccctaccgcgtggtg
gggctggtggtggggcccaagggtgctactatcaagcgcatccagcagcggacgcacacg
tacatcgtgacccccgggcgcgacaaggagccggtgttcgcggtcaccggcatgcccgag
aacgtggaccgcgcccgcgaggagatcgaggcgcacatcacgctgcgcaccggcgccttc
accgacgcgggccccgacagcgacttccacgccaacggcacggacgtgtgcctggacctg
ctgggggcggcggccagcctctgggccaaggcccccaacccgggccggcggccccccgcc
gccgcggccggcctccgaggggacagcgctctgggggccccgnggggccccgaggccttc
tacgcgggcagccgcgcgggaccgccggtgccggacgcggggccggccagcccctacggc
ggcgcggggaacgggggcttcaccttcagcggggacggcccgggcacgccggcggggccg
cccgcccccgaggactgcgacttcggcttcgacttcctggccctggacctgacggtgccg
gccgcggccaccatctgggcgcccttcgagcgcgccgcgcccctgcccgccttcagcggc
tgctcggccgtcaacggcgcccccgcgcccccggcgcccggagcgcggcgcaacagcggg
gccggcaccccgcgccactcgcccacgctgcccgagcccggcgcgctgggcctggagctc
ccgctggcgcgccgcggcgccccggacctggggggcgccctgccctggcgccccgcgcag
ggcgccctggccgccttctccagcggcgccggcttctccgcggccacctcgctgcccagc
ggctccgcggcctccccgtgctcgcccctggactcgagcgcccccgacggcggccggaag
cccgcggcccccgcggccccggcccccgccccggccctggcgcgcgagtgcgtggtgtgc
gcggagggcgaggtgatggccgcgctggtgccctgcgggcacaacctcttctgcatggac
tgcgccgtgcgcatctgcggcaagagcgagcccgagtgcccggcctgccgcacgcccgcc
acgcaggccattcatatcttttcctag
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