Talpa occidentalis (Iberian mole): 119240963
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Entry
119240963 CDS
T07495
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X3
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03082
ATP-dependent chromatin remodeling
tod04714
Thermogenesis
tod05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119240963 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119240963 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119240963 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119240963 (SMARCA4)
03036 Chromosome and associated proteins [BR:
tod03036
]
119240963 (SMARCA4)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119240963 (SMARCA4)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119240963 (SMARCA4)
Chromatin remodeling factors
BAF complex
119240963 (SMARCA4)
PBAF complex
119240963 (SMARCA4)
GBAF(ncBAF) complex
119240963 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
119240963
NCBI-ProteinID:
XP_037361716
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGSHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSTGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMSGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTST
PQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKP
RGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQ
EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNS
ILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGY
RKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPA
IGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSE
ESGSEEEEEEEEEEQPQPAQPPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEY
GVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILA
DEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSP
AARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLN
THYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNE
EETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLL
TDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRA
SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML
LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE
VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE
SRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMR
MDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVD
YSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESK
KQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYY
ELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFT
SVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSR
GSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcgaccaggcccttcaccaggccca
ggcccctcccctggagccatgttgggccctagcccaggaccgtcccctggctctgcccat
agtatgatgggacccagcccaggccctccctcagcaggacaccccatcccgacccagggg
cctggaggatacccacaggacaacatgcaccagatgcacaagccaatggagtccatgcac
gagaagggcatgtcggatgatccccgctacaaccaaatgaaggggatgggaatgcggtca
gggagccatgcagggatggggcctccaccaagccccatggaccagcactctcaaggttat
ccctcgcccttgggtggctccgagcatgcctccagtccagttccagccagtggcccatcc
tcaggcccacagatgtcaactgggccaggaggggccccattggatggtgctgacccccag
gctttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcaccaactc
agagctcagatcatggcttacaagatgctggccagggggcaacctctccctgaccacctg
cagatggcagtgcagggaaagcggccaatgtctgggatgcaacagcagatgccaacacta
cctccaccctctgtgtccgctacaggacctggccctggccctggccctggtcctggtcct
gggccgggaccaggaccagcacctccaaattacagcaggcctcatggtatgggagggccc
aacatgcccccccctggaccctcaggtgtgccccccgggatgccaggccagccacctgga
gggcctcccaagccctggcctgaaggacccatggcgaatgctgctgcccccacaagcacg
cctcagaagctgatccccccgcaacccacaggccgcccctcacctgctccccctgctgta
cctcccgccgcctcccctgtgatgccaccccagacccagtctccaggacagcctgcccag
cccgcccccatggtaccactgcaccagaagcagagccgtatcacccctatccagaagcct
cggggcctagaccctgtggagatcctgcaggaacgggaatataggctgcaggctcgcatt
gcacaccgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgtacc
aaagctaccattgaactcaaggcccttaggctgctgaacttccagaggcagctgcggcag
gaggtggtggtgtgcatgaggagagacacagcccttgagacagccctcaacgcaaaggct
tataagcgcagcaagaggcagtccctgcgcgaggcccgcatcactgagaagctggagaag
cagcagaagattgaacaggagcgcaaacgccggcagaagcaccaggaatacctcaacagc
attcttcagcatgccaaggatttcaaagaatatcacagatcagtcacaggcaaaatccag
aaacttaccaaggcagtggccacataccatgccaatacagagcgggaacagaaaaaagaa
aatgagagaattgagaaggagagaatgcggagactcatggctgaagatgaagaagggtac
cgcaaactcatcgaccagaagaaggacaagcgcttggcctacctcttacagcagacagat
gagtatgtggctaacctcacagagttggtgcggcagcacaaagctgcccaagttgccaag
gaaaaaaagaagaagaagaaaaagaagaaggcagaaaatgcagaaggacagacacccgcg
atcggacctgatggtgagcctctggacgagaccagccaaatgagtgacctgcctgtgaaa
gtgatccatgtggagagtgggaagatcctcacaggcacagatgcccccaaagcagggcag
ctggaggcctggcttgagatgaacccagggtatgaagtagctccaagatctgatagtgaa
gaaagtggctcagaagaagaagaggaggaggaggaagaggagcagccacagcctgcgcaa
cctcctgccctacctgtggaggaaaagaagaagattccagatccagacagtgacgatgtt
tctgaggtggatgcccgacacatcattgagaatgccaagcaagatgtcgatgacgagtat
ggtgtatcccaggccctcgctcgtggcttgcagtcctattatgctgtggcccatgctgtt
actgagagagtggataagcagtcagcacttatggtcaacggtgtcctcaaacagtatcag
atcaaaggcttggagtggctcgtgtccctgtataacaacaatctgaatggcatcctggcc
gacgagatgggtctgggcaagaccattcagaccatcgcactcatcacgtacctcatggag
cacaagcgcatcaacgggcccttccttatcatagtgcctctctcaacactgtcaaactgg
gcatatgaatttgacaagtgggccccctcggtggtgaaggtgtcctataagggttctccg
gcagccagacgtgctttcgtcccccagctccggagtgggaagttcaatgtcttactgacg
acatatgagtacatcatcaaagacaagcatatccttgcaaagatccgttggaagtacatg
atcgttgacgaagggcaccgcatgaagaatcaccactgcaagctgactcaggtcctcaac
acacactatgtggcaccccgccgcctgctgctcacaggcacaccactgcagaacaagctt
cccgagctctgggcacttctcaacttcctgctgcccaccatcttcaagagctgcagcacc
tttgagcagtggttcaatgcgccgtttgccatgactggagagaaggtggacctgaatgag
gaggaaaccatccttatcatccgtcgcctccacaaagtgctacgacccttcctgctccgg
aggctcaagaaggaggttgaggcccagttgcctgaaaaggtggagtacgtcatcaagtgt
gacatgtctgccctgcagcgtgtactctaccgacacatgcaggccaagggggtgctgttg
actgacggctcggaaaaggacaagaagggcaaaggtggcaccaagaccctgatgaacacc
atcatgcaactgaggaagatctgcaaccacccatatatgtttcagcacattgaggagtcc
ttttccgaacacttggggttcaccggcggcatcgtccaaggactagacctgtaccgagct
tcagggaaatttgagcttctcgatagaatacttcctaagctccgtgccaccaaccataaa
gtgctgctgttctgtcagatgacctccctcatgacgatcatggaagattattttgcatat
cgtggctttaaatacctcagacttgatggaaccacaaaggcagaagaccggggcatgctg
ctgaaaaccttcaatgaaccaggttccgagtacttcattttcctcctcagcacccgggct
gggggacttgggctgaatctccagtcggccgacactgtgatcatttttgacagtgactgg
aacccccaccaggacctacaagcgcaggaccgtgcccaccgcattgggcagcagaatgag
gtgcgggtgctccgcctctgcacagtcaacagtgtggaggagaaaattcttgctgcagcc
aagtacaagcttaacgttgaccagaaggtcatccaggctggcatgtttgaccagaagtcc
tccagccacgagaggcgtgccttcctgcaggccatcctggagcatgaggagcaggatgag
agcagacactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgcca
gcgggcgtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtgcctgat
gatgagaccgtcaaccagatgattgcccggcatgaggaggagttcgacctgttcatgcgc
atggacctagaccgcaggcgtgaggaggcccgcaaccccaagcggaagccacggttaatg
gaggaggatgagcttccctcgtggatcatcaaggatgatgctgaggtggagcggctgacc
tgtgaggaggaggaggaaaagatgtttggccgtggctcccgccatcgcaaggaagtagac
tacagcgactcactgactgagaagcagtggctcaaggccatcgaggagggcacgctggag
gagatcgaagaggaggtccggcagaagaaatcatctcggaagcgcaagcgagatagtgac
gccggctcctccaccccgaccaccagcacccgcagccgagataaggatgatgagagcaag
aagcagaagaaacgtgggcgacctcctgccgagaagctgtcccctaaccctcccaacctt
accaagaagatgaagaagattgtggatgctgtgatcaagtacaaggacagcagcagtgga
cggcagctcagtgaggtgttcatccagctgccctcccgcaaggagctgcccgagtactat
gagcttattcgcaagcctgtggacttcaagaagataaaggagcgcatccgaaaccacaag
taccgcagtctcaatgacctggagaaggacgtcatgctgctgtgccagaatgcacagacc
ttcaacctggagggctccctgatctacgaagattccattgttctacagtcagtattcacc
agcgtccggcagaaaattgagaaggaggatgacagtgaaggcgaggaaagcgaagaggag
gaggagggcgaggaggaaggctcggagtctgaatcccgctcagtcaaagtcaagatcaag
cttggccggaaggaaaaggctcaggatcggctgaaagggggccggcggcggccaagtcgt
gggtccagggccaagccggtggtaagcgacgatgacagtgaggaggaacaggaggaggac
cgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
