Talpa occidentalis (Iberian mole): 119241168
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Entry
119241168 CDS
T07495
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119241168 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119241168 (SMG7)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119241168 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
119241168 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
119241168
NCBI-ProteinID:
XP_037362170
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MSHECLKPFYLMRNWMFLQIVIVGENVSFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMT
DSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRA
NPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIV
KPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKG
DHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHV
YLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSY
SQDEQLCWTQLLALFMSFLGILCKCPLQNQSQEESYNAYPLPAVKVSMDWLRLRPRVFQE
AVVDERQYIWPWLISLLNSFHPHEEDLSIINATPLPEEFELQGFLALRPSFRNLDFSKGH
QGITGDKEGQQRQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSET
KENLILQETSTMESLSADGNLGLKSVLSTGRSLSNNCDMGEKPMVTFKENIKPREVNRDQ
GRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTE
LRKTPVSEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMG
SGYTFPAGVSVPATYLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQPQPPS
QQPLTALPAQPTAQSTSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQL
WNPPQVQGPLGKIMPVKQQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNH
NPSEVKVPEFYWDSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGS
PLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELVSHSS
SFLSLTTGFSLNQERYPNSSVFNEVYGKNLTTSSKAELNPSMAPQETSLYSLFEGTPWSP
SLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRPADRWKT
DKPAMGGFGVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMM
HPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgaatgtcttaaaccattctaccttatgagaaattggatgttcttgcagata
gtcattgtgggagaaaacgtttcatttaagtcccagatgaggaccggaaacttgaaatca
gaggagcatctgaaatcaagtaatattaggcaggcagaagtcctgaaggctgatatgaca
gattctaagctgggtccagctgaggtctggacatccaggcaggctctgcaggacctgtac
cagaaaatgctagttacagatttggagtacgctttagacaagaaagtagaacaggatctc
tggaatcatgcctttaagaatcagatcacaacactacaaggccaggcaaagaatcgagca
aacccgaatcggagtgaagttcaggcaaacctttctctgttcctagaggcagctagtggc
ttctatactcagctattacaagaactgtgtacagtgtttaatgtagatttaccatgccgt
gtgaagtcttcccagttgggaattatcagcaataaacagacgcataccagcgccatagtg
aagccacagtctagctcctgttcctatatctgccagcactgcctcgtccatctaggagac
atcgctcgatacagaaaccagaccagccaggcagaatcctactataggcacgcagctcag
cttgtcccctccaatggtcagccttacaatcagttggctatcttagcttcttccaaagga
gaccatctgaccacaattttctactactgcagaagtattgctgtgaagttccctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagccgggatgaggtg
aaaaccaagtggggtgtttctgacttcatcaaggcctttattaaattccacggtcatgta
tacctgagtaagagcttggaaaagttgagccctcttcgagaaaaattggaagaacagttt
aagagactgctattccaaaaagctttcaactctcaacaattagttcatgttactgtcatt
aacctgtttcaacttcatcaccttcgcgactttagcaatgaaacagaacagcatagttac
agccaagatgaacaactgtgttggacacagttgctagccctcttcatgtcttttcttggc
atcctgtgcaagtgtcctctccagaaccagtctcaggaggagtcctacaatgcctatccc
cttcctgcagtcaaggtctccatggactggctgagacttagacccagagtcttccaggag
gcagtggtggatgagagacagtacatttggccctggttgatatctcttctaaatagtttc
catccccatgaagaagatctgtcaattattaatgctacaccacttcctgaggagtttgag
ttacaaggattcctggctttaagaccttctttcaggaacttggatttttccaaaggccac
cagggtatcactggagacaaggaaggccagcaacgacaaatacgacagcagcgcttaatc
tctataggaaagtggatcgctgataatcagccaaggctgattcagtgtgaaaatgaggta
gggaaattgttgtttatcacagaaattccagagttaatcctggaagaccccagtgaaacc
aaagagaacctcattctgcaagaaacatccacaatggagtcactgagtgcagatgggaac
ctgggactgaaatctgtgctgtctacaggccgaagtctaagcaacaactgtgacatggga
gagaaaccaatggtcaccttcaaagaaaacattaagccacgagaagtgaacagagaccaa
ggaagaagttttcctcccaaagaggtgagaagggactatagcaaaggaataactgtaact
aagaatgatggaaagaaggacaacaacaagaggaaaactgaaaccaagaaatgcacctta
gaaaagttacaggaaacaggaaagcagaatgtggcagtgcaggtcaaatcccagacagag
ctaagaaagactcccgtctctgaagccaggaaaacacctgtaactcaaaccccgagtcaa
gcaagtaactcccagttcatccccattcatcaccctggagccttccctcctcttcccagc
cggccagggttcccgcccccaacatacgttatcccccctcctgtggcattttcaatgggc
tcaggttacaccttcccagctggtgtttctgtcccagcaacctatcttcagcctacagct
cactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccag
caacggccctctggaccagggccaatgaaccagggacctcaacaaccacagccaccttcc
cagcaacccctcacagctttaccagctcagccaacagcacagtctacaagccaattgcag
gttcaagctctagctcagcaacagcaatcccctacaaaagccgtgccagctttggggaag
agccctcctcaccactctggattccagcagtatcaacaggcagatgcctccaaacaactg
tggaatccccctcaggttcaaggcccattagggaaaatcatgcctgtgaaacaacagccc
tactaccttcagacccaagaccccataaaactgtttgagccgtcattgcaacctcctgta
atgcagcagcagcctctagagaaaaaaatgaagccttttcccatggagccatataaccat
aatccctcagaagtcaaggtcccagaattctattgggattcttcctacagcatggctgat
aacagagctgtcatggcgcagcaagcaaatatggaccgcaggggcaaacggtcaccagga
gtcttccgtccagagcaggatcctgtgcccaggatgccatttgaggaccccaagggctcc
cctctgcttcctccggacctgttaaaaagtctggctgccttggaggaagaggaagagctg
attttctctaaccctcctgatctttacccagctctgctggggcctctcgcctctcttcct
ggacgaagcctctttaaatccctactggagaagccctcagagctcgtgtcacactcatcc
tctttcctgtccctcaccaccggcttctctctcaatcaggaaaggtacccaaatagcagt
gtgttcaatgaagtgtatgggaaaaacctgaccaccagctccaaagcagaactgaacccc
tctatggccccccaggaaacatcactgtactctctttttgaagggactccgtggtctcca
tcacttcctgccagttcagatcattcaacaccagccagccagtctcctcattcctctaat
ccaagcagcctgccaagctcccctccaacacacaaccataattctgttccattctccaat
tttggacccattgggactccagataacagggataggagacctgcagatcggtggaaaact
gataagccagccatgggtgggtttggcgttgactatctctcagcaacatcctcctctgag
agcagctggcatcaggccagcactcccagtggcacctggacaggccacggcccctccatg
gaggattcctctgccgtcctcatggaaagcctaaagtctatctggtccagttccatgatg
caccctggaccttccgctctggagcaactgctgatgcagcagaagcagaaacagcagcgg
ggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
