Talpa occidentalis (Iberian mole): 119241268
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Entry
119241268 CDS
T07495
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tod03000
]
119241268 (RC3H1)
04121 Ubiquitin system [BR:
tod04121
]
119241268 (RC3H1)
Transcription factors [BR:
tod03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
119241268 (RC3H1)
Ubiquitin system [BR:
tod04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119241268 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
119241268
NCBI-ProteinID:
XP_037362336
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDE
GAVDLPNRKPPALPNGIVSAGNTVTKLIPRGTDTNYDSSLKPGKIDHLSSSAPGSPPDLL
EPVPKSISALPVNPHPVPPRGPADLPPMPVTKPPQMVSRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYHQGMYYTPPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRLYPAQSYGREEIFRESPIPIEIPAAAVPSYVPESRERYQQMDGYYP
VAPHPTQIRPYMREPSYSRFPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPT
LPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEMM
NVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPVQAIAP
QGAPTKSINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERISISEVASHGKPLPSA
EREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLASQPQPPPPPPKWPGMISS
EQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPPEDLTFS
DMPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaaaatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
atagagctcctccctgtgaactcagcattgctgcagctggtgggtgctcaggtccctgag
cagcagcccattactttgtgtagtggggttgaagacacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtatctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcaccactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgtcaactagtggaagaagaaggcaggattcgtgccatgagggccgctcgatct
ttgggcgaacgaacagtcacagagctcattctccaacaccagaatcctcagcaactctct
tccaatctttgggcagcagtcagggctaggggttgccagttccttggaccagcaatgcag
gaggaagctttaaagctggttctgctggcgttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggttaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaattccgaacctatgaagcactgcgg
cgagaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccagtggtcctcattgctttatggagaccagtctcacaagtctcatatgcagtccatc
attgataagttgcagaccccagcctcttttgcacaaagtgttcaggaattaacaattgct
ctccagcggactggagatccagcaaacttgaaccgactaagaccccatttggagctgtta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatggg
ctggttgctgtgcgtacagtggtacatgggctggttgattatattcagaatcatagcaaa
aaaggagcagaccaacagcagcctccacagcacagtaaatataaaacatacatgtgtcga
gatatgaagcagagaggaggatgtcctcgtggagccagctgtacatttgcacactcacag
gaggaactggaaaaattccgtaaaatgaataagcgcctggttcccagaagacccctgagt
gcctctttgggtcaacttaatgaagtgggcctgccttcagcagctatacttccagatgaa
ggtgcagtggatctgcctaacagaaaaccccctgctctgccaaatggaattgtatcagca
gggaacacagtaacaaagctgattccacgagggacagacaccaactacgattctagtctg
aaaccaggaaagatagatcacctgagcagtagtgcccctggatcccctcctgacctgcta
gaacctgtccccaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
ggaccagcagaccttccacctatgcctgtcaccaaaccacctcagatggtatcacgaggc
tctcagttatatccagctcagcaggcagatgtttattatcaggatcctcgcggagctgct
ccaccatttgaaccagcaccttatcatcagggcatgtactatactccaccaccacaatgt
gtgtcccgctttgtccgacctccaccatctgcacctgaacctggtcctccctacttggat
cattatccaccctacctccaagatcgtgtagtaaattctcagtatggcacacagccacaa
caatacccacctatgtaccctccacactatgatggccgtcgactataccctgctcagtct
tatgggagagaggaaattttccgagaaagtcctattcccattgaaattccagctgcagca
gtaccgtcctatgtaccagaatccagagaaagatatcaacaaatggatggttactatcca
gtggctcctcatccaactcagatcagaccatacatgagagagccttcttatagccggttt
cctcctcctccgcagccccatcctagcctagatgagctgcatcgcagacggaaagaaata
atggcccagctagaggaaagaaaggtcatttctccacctccttttgcaccatcaccaaca
ttacctcctaccttccatcaggaggaatttttggatgaagacttgaaggtagctggaaaa
tacaaaggaaatgattatagccagtactccccttggtcatgtgacaccatcggctcctac
attggaaccaaagatgcaaaacccaaagatgttgtggcggcagggagtgtggaaatgatg
aatgtggaaagtaagggaatgagagaccaacgactggatcttcagagaagagcagcagaa
accagtgatgatgacctcatcccatttggagatcgaccaacagtatctcggtttggtgcc
atctctcgaacttccaaaacaatctatcagggtgctggcccagtgcaagccatagcacct
cagggagcgcccacaaaatctattaacatttcagattatagtccatatggaacccatggt
ggctggggaggctctccatattcacctcatcaaaacataccttctcagggacacttcagt
gagagggagagaatatccatatcagaagtggccagtcatggaaaacccctcccatctgct
gagagggaacagctacgactagaattgcagcaactaaatcatcaaattagccaacagacc
cagttacgtgggctagaggctgttagtaatagactggtgttgcagagggaggcaaacacc
ttggcaagccagccacagcccccaccaccacctccaaaatggcctggaatgatctcaagt
gagcagttgagcttggaactacatcaggtggaaagggaaatcgggaagagaacccgtgaa
ctgagtatggagaaccagtgttctctggatatgaaaagcaaattgaatacaagtaagcaa
gcagaaaatggacaaccagaaccacaaaataaggttccacctgaggaccttacattcagt
gatatgccgaatggatcagctttgacacaagagaatatcagcctcttatcaaacaagacc
agttctctgaacctgtcagaggaccctgagggaggaggggacaacaatgactctcagaga
tcaggagttacacccagttctgccccctaa
DBGET
integrated database retrieval system
