Talpa occidentalis (Iberian mole): 119241566
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Entry
119241566 CDS
T07495
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tod04121
]
119241566 (TRIM56)
Enzymes [BR:
tod01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119241566 (TRIM56)
Ubiquitin system [BR:
tod04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119241566 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
119241566
NCBI-ProteinID:
XP_037362812
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLAEGGHLRCPECR
ETVPVPPSGVAAFKTNFFVNGLLDLVKARAGGDLRAGKAACALCPLMGGTSAGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPALEKLLEGVDSNLAELEATRMLEKEA
LAQLREQAAKVGMQVEEAAEGVLRALLAQKQEVLGQLRAHVEAAEEAARKRLGELEGREQ
VAKEAAAFARRVLSLGREAEILSLEGAITQRLQQLQGSPWMPGPAPCLLPQLEIHPGLQD
KNCHLLRLSFEEQQPQKDSGKEGARSQGSSETQSCIENGAKNERRDGVQPQGKDRAPTPQ
EDGTQTPKEGRAQSPTEDERAQTPRGGRLNKKKKFKDRFKSISREPSPAPGPNLEGSGLL
PRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVADEQNKALKRFSLNGDYKGAVPVPE
SCSPCSVAALQGAVAFSAGARLYLISPDGEVQWRRALSLCQASHAVAAMPSGDRVAVSVS
GHVEVYNMEGSLATRFIPGGRASRGQRALVFLTTSPEGNFVGSDWQQNSLVVCDGLGQVI
GEYRGPGLHGCQPGSVSVDKRGYIFLTLREVNKVVILDPRGSLLGDFLTAYHGLEKPRVT
TMVDGRYLVVSLSNGTIHVFRVRSPDS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggatcctcaccctccctgctggaggccctgagcagtgacttcctggcc
tgtaaaatttgcctggagcagctgcgggcaccaaaaacattgccctgcttgcacacctac
tgccaggactgtctggcccagctggctgagggtggccacctccgatgtcccgagtgccga
gagactgtgcccgtgcccccctcaggcgtggccgctttcaagaccaacttcttcgtcaat
gggctcctggacttggtgaaggctcgggcgggtggagaccttcgtgcagggaaggcagcc
tgtgctctgtgtcccctgatgggcggcaccagtgccggggggccagccacagcccggtgt
ctggactgtgctgacgacttgtgccaggcctgtgccgatgggcaccgctgcacccgccag
acccacacccaccgagtggtcgacctggtgggctacagggcagggtggtatgatgaagag
gcccgggagcgtcaggctgcccagtgcccccagcaccctggggaggccctgcgcttcctg
tgccagccctgttcccagctgctgtgccgtgagtgccgcctggaccctcatctggaccac
ccctgtctgcccctggctgaggcagtgcgtgcccggagaccagccctggagaagctccta
gaaggtgtagacagcaacctggccgagctggaggccactcgaatgctggagaaggaagcc
ttggcccagctgagggagcaggcagccaaggtggggatgcaagtggaggaggcggctgag
ggagtcctccgggccctcctggcccagaagcaggaggtgctgggccagctacgggcccat
gtggaggctgctgaagaggctgcccggaagcgactgggggagctggagggccgggaacag
gtggccaaggaggctgctgcctttgcccgtcgggtgctcagcctgggtcgtgaggctgag
atcctctcgctggagggggcgatcacacagaggcttcagcagctacagggtagtccctgg
atgcctgggccagccccttgcctgctgcctcagctggagatccaccctggactccaagac
aagaactgccatttactacggctttcctttgaggagcagcagccacagaaggacagtggg
aaagaaggagccaggagccagggaagcagcgaaacccagagctgcattgagaatggagcc
aagaatgagagacgcgatggagtccagccccagggtaaggatagagccccgacaccccaa
gaagatggaacccagaccccgaaagagggcagagcccagtcacccacagaagatgaaaga
gcccagaccccgaggggtggcagattaaacaagaagaagaagttcaaagacaggttcaag
tcgatttcccgggagcccagcccagcaccagggccaaacctggagggttctggcctcctc
cccagacccatcttttcctgcagctttcccacgaggatgcctggagacaagcggtctccc
cggatcactggactctgtccctttggcccccgggagatcctggtggccgatgaacagaac
aaagcgctaaagcgcttttccctcaacggtgactacaaaggagcagtgcctgtccccgag
agctgctccccgtgcagtgtggcagccctgcagggtgccgtggccttctcggccggtgcc
aggctctatcttatcagccctgatggagaggtgcagtggcgccgggccctgagcctatgc
caggccagccacgctgtggctgccatgccgagcggggaccgggtggccgtcagcgtgtct
ggccacgtggaagtatacaacatggaaggcagcctggccacccggtttatccctggaggc
agggccagccggggtcagcgggcgctggtgttcctaaccaccagcccggaggggaatttt
gtgggttcagactggcagcagaatagcttggtggtctgtgacgggctgggtcaggtgatc
ggggagtaccgagggccaggcttgcatggctgccaaccaggctccgtgtctgtggataaa
aggggctacatctttctgaccctgcgtgaggtcaacaaggtggtgatcttggaccccagg
gggtcactgcttggtgacttcctgacagcctatcatggcctggaaaagccacgggtgacc
accatggtggacggcaggtacctggttgtatccctcagtaatggaaccatccatgtcttt
cgggttcgttctcctgacagttaa
DBGET
integrated database retrieval system
