Talpa occidentalis (Iberian mole): 119241814
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Entry
119241814 CDS
T07495
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119241814 (TNRC6A)
03036 Chromosome and associated proteins [BR:
tod03036
]
119241814 (TNRC6A)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119241814 (TNRC6A)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119241814 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
M_domain
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119241814
NCBI-ProteinID:
XP_054549765
LinkDB
All DBs
Position
Unknown
AA seq
1942 aa
AA seq
DB search
MQLVAEPGLEARCPGSQDIPLPEEWNRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKK
DDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANCNNGTSTATSTNNNAKRATANNQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQALPRYPREVPPRFRHQEHKQLLK
RGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQSNGEVQNSKNQSDINHSTSGAHYENP
QRGPVSSTSDSSTNCKNAVVNDSPEREAWPSAPGSDPELASECMDADSASSSESERNITI
MASGSTGGEKDGLRNSTGLASQNKFVVGSSSNNVGHGSSTGPWGFSHGAIISTCQVSVDA
PESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLENNGLALKGPVGSGSSG
INIQCSPISQMPNNQSINSKVGGSSTHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEM
TGPNNTTNFMTSSLPNSGSVQNNELPSNTGAWRVSTMNHPQIQAPSVMNGTSLSHLSNGE
SKNGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNATLMQPGINGPMGTNFQVNTNKGG
GVWESGAANSQSASWGSGNSANSGGSRRGWGTPAQNTGTNTPSVEWNKLSSNQHSNDSAN
GNGKTFTNGWKSTEEEDQGSATSQTNEQNSVWAKSGGPVESEGSTESTGRLEEKVTGENQ
SRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTDASPRGERKTDNGTE
AWGSSATQTFNSGACIDKTSPNSNDTSSVVGWGDPKPAVRWGDSKGSNCQGGWEDDSAAT
GMVKSNQWGNCKEEKSAWNDSQKNKQGWGDGQKSNQGWSVSAGDNWGETSRSNHWGEANK
KSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESSKANPSPGWGDPPKSNQS
LGWGDSSKPVSSPDWNKQQDIVGSWGIPPATGKPPGTGWLGGPIPAPAKEEEPTGWEEPS
PESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNIPNGGSRPDQQAQAHQLLPSASAIAN
KEAGSGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGP
QALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWNSSSSQELNSSLNWPPYTK
KMSSKGLSGKKRRRERGMMKGGNKQEETWINPFVKQFSNISFSRDSPEENVQSNKMDLSG
GMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMERSPYFDKNGNPSMFGVGNT
AAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAM
LNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMMQQSRQL
DPNLLVKQQTPPSQQQSLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIGLNSNLN
VNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNSS
TSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINN
LSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDSK
LTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWGN
SDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNAL
VRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPGWQSLGSSQS
RLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPPSSSDPRGI
SSPSPINAFLSVDHLGGGGESM
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagtggcagagccaggcctagaagccaggtgtcctggctctcaagacattccg
ctgcccgaggagtggaacagagaattggaggctaaagctaccaaagacgtggaaaggaat
ctcagcagggatttagtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaa
gacgacaagaaaaagaaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtg
ccagaacagataaagcccagtgtaagccagcctcagcctgccaactgtaataacggcact
tccacagcaaccagcactaataataatgccaagcgagccacagccaacaatcagcaacag
cagcagcaacagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcaa
cagcagcaacagcagcagcagcaacagcagcaacagcaacaaccaccacaggccttgcct
cggtatcctcgtgaagtaccaccacgatttcgccaccaggaacacaaacagcttctaaag
aggggtcagcattttcctgtcatagcagcaaacctgggatctgctgttaaagtgttaagc
agccagtcagaaagcagtgctttaacaaatcaacagccacaaagtaacggagaggtgcag
aacagcaaaaaccagtcagatataaaccacagtacttcaggagcccattatgaaaacccg
cagcgggggcctgtgtcttctacaagcgactctagcacaaactgtaagaacgctgttgta
aacgactctcctgaaagagaagcatggccctcagcccctggcagtgatcctgagttggct
tcagaatgtatggatgctgattctgcttccagttctgaatcagagagaaacatcactatc
atggcttcagggagcacaggcggtgaaaaagatggccttcggaatagtactggacttgct
tctcaaaacaagtttgtggttggtagcagcagcaataatgtgggccatggaagtagtact
gggccatgggggttttcccatggagccataataagcacatgtcaggtgtctgtggatgct
cctgaaagcaaatcagaaagtagcaacaatagaatgaatgcttggggcactgtaagttct
tcatcaaatggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctgg
ccagtattagagaacaacggacttgccctaaaagggcctgtagggagtggtagttctggc
atcaatattcagtgcagtcccataagccagatgcctaacaatcagagtattaactctaaa
gtgggtggctcttctacccatggtacctggggaagccttcaggaaacgtgtgaatctgaa
gtaagtggtacacagaaggtttcattcagtggtcaacctcaaaatattaccactgaaatg
actggaccaaataacactactaactttatgacctctagtttaccaaactccggttcagta
cagaataatgaactgcctagtaatacaggggcctggcgcgtgagcacaatgaatcatcct
cagatacaggctccatcagttatgaatggcacttccctttctcaccttagcaatggagag
tcaaaaaatggaggctcttacggtactacatggggtgcctatggttctaattactctgga
gacaaatgttcaagccctaatggccaagcaaatggtgacactgtgaatgcaactctaatg
cagcctggtataaatgggcctatgggcactaactttcaagttaacacgaataaaggagga
ggtgtgtgggagtctggggcagcaaattcccagagcgcatcatggggaagtggaaacagt
gcgaattctgggggaagtcgaagaggatggggcacccctgcacaaaacactggcactaat
acacccagcgtggagtggaacaaactgtctagcaatcagcattccaatgacagtgcaaat
ggcaatggtaagacgtttacaaatggatggaaatctactgaggaagaggatcagggttct
gccacatctcagacaaatgagcaaaacagcgtgtgggccaaatcaggaggtccggtggag
agtgaaggtagtacagaaagcactggacgcctggaggaaaaagtaactggggaaaatcag
agtagagatagaagaaaaatagatcagcacaccttactccaaagcattgtaaacagaact
gacttagatccacgtgtcctatccaactctggttggggacagactcctattaagcagaat
actgcctgggatactgatgcatcacctagaggggaaagaaagactgacaatgggacagag
gcctgggggagctctgcaacacagacttttaactcaggggcatgtatagataagactagc
cctaatagtaatgatacctcatctgtagtaggttggggagatcccaaacctgctgtgagg
tggggagattccaaaggctcaaactgccaggggggatgggaagatgattctgctgctaca
ggaatggtcaagagcaatcagtgggggaattgcaaagaggagaagtctgcatggaatgat
tcgcaaaagaacaaacagggatggggtgatggacaaaaatcaaaccaagggtggtccgtt
tctgccggtgataactggggagaaacttcaaggagtaaccattggggtgaagctaataag
aaatctagctcaggaggtagtgacagtgacagatctgtttctggttggaatgaactcggt
aaaactagttcttttacttggggaaataacataaatccaaataattcatcaggatgggat
gaatcttctaaagctaatccttccccgggatggggagatcctccaaagtctaatcagtca
ctaggttggggagattcgtccaagccagtcagttctccagactggaacaagcaacaagac
attgttggatcttggggaatcccaccagctacaggcaagcctcctggtacgggctggctg
gggggacctattccagccccagctaaagaagaagaacctacaggctgggaggaaccatcc
ccagaatccatacgccgcaaaatggagattgatgatggaacttcagcttggggagatcca
agcaaatacaactacaaaaatgtgaacatgtggaacaaaaacatcccaaatggtggcagc
cgtccagaccagcaagcacaggcacaccagttgctgccatctgcaagtgccatcgcaaac
aaagaggcgggcagtggctccggctggggtgagccctggggggagccttccactccagcc
acaactgtggataatggtacttcagcgtggggtaaacccatagacagtggtcccagctgg
ggggaacccattgctgcggcatccagcacatccacgtggggctccagctctgttggtcct
caggcgttaagcaaatctgggccaaaatctatgcaagatggctggtgtggtgatgatatg
ccattgcctggaaatcgccccactggctgggaagaggaagaggatgtagagattggaatg
tggaatagtagttcatctcaagaacttaattcatctttaaattggccaccatatacaaag
aaaatgtcatcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaaa
ggtggaaacaaacaagaagaaacatggataaatccatttgttaaacagttttcaaatatc
agtttttcgagagactcaccagaagaaaatgtacaaagcaataagatggacctttctgga
ggaatgttacaagacaaacgaatggagatagataaacatagtctaaatattggtgattac
aatcgaacggtcgggaaaggccctggttctcggcctcagatttccaaagagtcttccatg
gagcgcagtccttattttgataagaatggcaatcccagtatgtttggtgttggaaacaca
gcagcacaaccccggggcatgcagcagcctccagcacaacctcttagttcatctcagcct
aatctccgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattgctg
aagtatgcaccaaacaacggtggcctgaatccgctctttggccctcaacaggtagccatg
ctgaaccagctatcccaactaaaccagctttctcagatctcccagttacagcgattgtta
gcgcaacagcaaagggcgcagagtcagagaagcgtgccttctgggaaccggcagcagcaa
gaccagcagggtcgacctcttagtgtgcagcagcaaatgatgcagcagtcccgtcaactt
gatccaaacctgttggtaaagcaacagactccaccatctcagcagcagtcactccatcag
ccagccatgaaatctttccttgaaaatgtcatgccccacactacacctgagctgcaaaaa
gggccatcaccaataaacgctttcagcaactttcctataggcttgaattcaaacttgaat
gtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaagtggactaca
gtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacatggtgctatt
tcaagtggtttcaggctggaagagtctccatttgttccctatgactttatgaacagcagt
acttcaccagccagtcctccaggttcaataggagatggctggccacgtgccaaatcgcct
aacggctctagcagtgttaactggccaccagaatttcgccctggtgaaccatggaaaggt
tatccaaacatcgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaat
ctttcaattaatactgtgcgggaagtcgaccacctcagggacaggaacagtgggtcatcc
tcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaac
tacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaa
ttgacgtggtctcctggttcagttacaaacacctctctggctcatgagctgtggaaggtc
cctttgccacctaaaaacatcactgctccgtcccgccctcctccgggactgactggtcag
aagccgcccttgtctacgtgggataattctccccttcgtgtgggtggaggatggggaaat
tctgacgccaggtataccccaggttccagctggggtgagagcagctcagggagaataaca
aattggcttgttctaaaaaaccttacacctcagatcgatggctccactctgcgtactctg
tgcatgcagcatggcccactgataacattccacctgaacctcccacatggaaatgcattg
gtccgttacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgcgtg
ctggggaacactactattctcgctgagtttgccagtgaagaggagatcagtcgttttttt
gcacaaagtcagtctctgaccccttctcccggctggcagtctctcgggtccagccagagc
cggctgggctccctcgactgctcccactcattctccagccggaccgatctcaatcactgg
aatggtgctgggctgtcgggaactaactgtggagaccttcacggcacttcactctgggga
accccacattattccacaagcctgtggggtcctccaagcagcagcgacccccggggaatt
agcagcccatcccccattaatgcttttctttctgttgaccacctgggtgggggtggagag
tccatgtaa
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