Talpa occidentalis (Iberian mole): 119242635
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Entry
119242635 CDS
T07495
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tod03009
]
119242635
Enzymes [BR:
tod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119242635
Ribosome biogenesis [BR:
tod03009
]
Eukaryotic type
Pre-60S particles
Helicases
119242635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
119242635
NCBI-ProteinID:
XP_037364057
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MAAGTRPAAGPRSRAAMAQWRKKKGLRRRRGAAAQARSSDSEDGEFEVQAEDDVRARRCP
GPGRPLPAFPASECMSDVEPDTREGMEAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVP
TPIQRKTIPVILDGKDVVAMARTGSGKTXCFLIPMFERLKTRSAQTGARALVXSPTRELA
LQTXKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQ
SVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLI
RLDVDAKLNEQLKTSFFLVREDTKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLSELLT
TQRVSCAHIYSALDQTARKINLAKFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKG
KLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPTRSPQGAPGGDGV
LGRVPQGVVDDEDCGLRTTLENSLELRGLGRVADNAQQQYVRSRPAPSPESIKRAKELDL
AELGLHPLFSSRFEEKELQRLRLVDSIKNYRSRATIFEINASSRDLSSQVMRAKRQKDRK
AIASFQQGRQDRQEGLTSRALSCPAPRETQPEQEEEEAAVRESVEDIFTEVVGRKRQQPG
LERDAKRRREGARQRDQEFYVPYRPKDFDSERGLSVGGDGGAFEQQVAGAVLDLMGDEGQ
NLTRTRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRD
SEDEGPAHQRGPARRGGRWGRGPGAAQSRSPAAPSGHVRSELKTKQQILKQRRRAQKMRF
LQRGGLKQLSVRNRRRVQELQRGAFGRGAHSKKGKMRKKM
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcacgcgcccggcggccggccctcggtctcgcgcggccatggcccagtgg
aggaagaagaaggggctccggaggcgccggggcgcggccgcccaggcgcgcagcagcgac
tcggaggacggcgagttcgaggtccaggcggaggacgacgtgcgggcccgaaggtgcccg
ggtcctggcagacccttgcccgccttccccgcctcagaatgcatgtcggacgtggagccg
gacacgcgggaggggatggaggcccagaacaagaagaagaagaagtcgggcggcttccag
tccatgggcttgagctatccagtattcaaaggcatcatgaagaagggctacaaggtgccc
acgcccatccagaggaagaccatcccggtgatcctggacggcaaggacgtggtggccatg
gcccgcacgggcagcggcaagacgngctgcttcctcatccccatgtttgagcggctcaag
acccgcagcgcccagaccggggcccgcgctcttgtcncttctcccacccgggagctggcc
ctgcagacantgaagttcaccaaggagctgggcaagttcaccggcctcaagactgccctg
atcctgggcggggacaaaatggaagaccagtttgcggccctgcacgaaaatcccgacata
atcattgccacgcctgggcgcttggtgcatgtggctgtggagatgaacctgaagctgcag
agcgtggagtacgtggtgttcgatgaggccgacaggctctttgaaatggggttcgcagag
caactgcaggaaatcatcgcgcgcctcccggggggccaccagacagtcctgttctccgcc
actctgcccaaactgctggtggagtttgcccgggcaggcctcacagaacctgtgctcatc
cgactagatgtggatgccaaactcaacgagcagctcaagacctccttcttccttgtgcgt
gaggacaccaaggctgccgtgctgcttcacctgctgcgcaatgtggtgcggccgcaggac
cagacagtggtgtttgtggccacaaagcaccatgccgagtacctcagtgagctgctgaca
acccagcgggtgagctgcgcccacatctacagcgccctggaccagacggcccgcaagatc
aacctggccaagttcacacatggcaagtgctctgccctcatcgtgaccgacctggcagcc
cggggcctggacatcccgctgctagacaacgtcatcaactacagcttccccgccaagggc
aagctttttctgcaccgcgtgggccgtgtggcccgggctggtcgaagtggcacagcctac
tccttggtggcccccgacgaggttccctacctgctggacctgcacctgttcctgggccgt
gccctcacccttgcccgccccacgaggagccctcagggcgcaccgggcggggacggagtg
ctgggccgcgtgccgcagggcgtggtggacgacgaggactgcggcctgcggaccacgctg
gagaactcgctggagctgcgaggcctgggccgcgtggccgacaacgcccagcagcagtac
gtgcgctctcggccggcgccctcacccgagtccatcaagagggccaaggagctggacctg
gcagagctgggcctgcaccccctcttcagctcacgcttcgaggagaaggagctgcagcgg
ctgaggctggtagacagcatcaagaactaccgctcgcgggcgaccatctttgagatcaac
gcctccagccgggacctgagcagccaggtgatgcgagccaagcggcagaaggaccgaaag
gccatcgccagcttccagcaggggcggcaggaccggcaggagggcctgaccagccgagcc
ctgagctgcccggccccgcgggagacgcagcccgagcaggaggaggaggaggcggctgtg
agggagagtgtggaggacatcttcacagaggtcgtgggccgcaagcggcaacagccagga
cttgagcgggatgccaagaggcggagggaaggggcccgccagcgggaccaggaattctac
gtcccctaccggcccaaggacttcgacagcgagcggggcctgagcgtcggtggggacggg
ggtgcctttgagcagcaggtggcgggcgcggtcctggacctgatgggggacgaaggccag
aacctgaccaggacgcggcagcagctcaagtgggaccggaagaagaagcggtttgtgggg
cagtcgggacaggaggacaagaagaagatcaagaccgagagtggccgctacatcagcagc
tcctacaagcgggacctctaccagaagtggaagcagaaacagaaaattgacgatcgcgac
tcggaggacgaggggccggctcaccagcggggccccgcccggagaggtgggaggtggggc
cgaggcccaggtgcagcccagtcccgcagtccggccgccccctctggccacgtgcgctcc
gagctgaagaccaagcagcaaatcctgaagcagcggcggcgggcccagaagatgcgcttc
ctgcagcgcggaggcctcaagcagctctctgtccgcaaccgccgccgggtccaggagctg
cagcggggggccttcggccggggggcccactccaagaagggcaagatgaggaagaagatg
tga
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