Talpa occidentalis (Iberian mole): 119244683
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Entry
119244683 CDS
T07495
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X2
KO
K14327
regulator of nonsense transcripts 2
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03013
Nucleocytoplasmic transport
tod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119244683 (UPF2)
03015 mRNA surveillance pathway
119244683 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119244683 (UPF2)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119244683 (UPF2)
mRNA cycle factors
P-body specific factors
119244683 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
119244683
NCBI-ProteinID:
XP_037366502
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCSERRPVSSREKPKDEIKVTAKKELIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKQEEEERKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRIKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKNAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESNKDDSKEAKELKDNKEITNPDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NADGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttactaaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagatgag
atcaaggttactgccaagaaggagcttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggtg
aaagcagaggaggaattaaagaaaaaagaggaagaagaaaaaaagaaacaggaagaggag
gagagaaagaagcaagaagagcaggcaaaacgtcagcaagaagaagaagctgcccaattg
aaagagaaagaagaatcccttcagcttcaccaagaagcttgggaacgacatcagctaagg
aaagaacttcgtatcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagattcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaactatt
acagaacaacagagagactccttgtcccatgatttcaatggcctaaatttaagcaaatac
atcgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtaaattgt
gctgtgcacttatgctctctctttcaccagcgttatgctgactttgccccatcacttctt
caggtttggaaaaaacattttgaagcaaggaaagaggagaagacacctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgataag
gaaggtctttccttaatctatgaacagcttaaaaatattattaatgctgatcgggaatcc
catactcatgtttccgtggtgattagcttttgtcgacattgtggagatgatattgctgga
cttgtaccacggaaagtaaagaatgctgcagagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacaacaacctttccagaaccttttaaaagaatactttacg
tctttgaccaaacatctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctgcattctaaaggagagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaaattgctggcaaattctcagtccttagctgatcttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatggacctggaatt
gatatatttacaccaggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaacctcattgatttgaaggcttttgttccagccatc
ttatttaaagataatgaaaaaagttgtcagaataaagagtccaacaaagatgattccaaa
gaggccaaagaacttaaggataataaggagataacaaatcctgatgatttggagcttgag
ttggagaaccttgaaattaatgatgacaccttggagttagagggtggagatgaagctgaa
gatcttacaaagaaacttcttgatgaacaagaacaagaagatgaagaagccagcactgga
tctcatctcaagctcattgtagatgctttccttcagcagttgcctaactgtgtcaatcga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaatacaaaggcaaatagg
aaaaagttggtgcgggcactctttatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgtatgtctgatgtagcagaggatctttgt
tccatgctgaggggagatttcagatttcatgtacgaaaaaaggaccagatcaatatagaa
acaaaaaacaaaactgttcgttttattggagaactaactaaattcaagatgttcacaaaa
aatgatacacttcattgtttaaagatgcttctgtcagacttttcccatcaccatattgaa
atggcatgcactctactggaaacatgtggaagatttcttttcagatctccagaatcgcac
ctgaggaccagtgtacttttggaacaaatgatgcgaaagaaacaagcaatgcatctcgat
gcaagatacgtcacaatggtggagaatgcctactactactgcaacccacctccagctgag
aaaactgtgaaaaagaaacgtcctcctctccaggaatatgtccggaagcttttgtacaag
gatctctccaaggtgaccactgaaaaggtcttgagacaaatgcgaaaattgccctggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatat
aatagtattcattgtgtagccaacctcttagcaggactagtgctctatcaagaggatgtt
ggaattcatgttgtggatggagttttagaagatatccgtttaggaatggaggttaatcaa
cctaaatttaatcagagacgtatcagcagtgccaagttcttaggagaactttataattac
cgaatggtggaatctgctgttatttttagaactctttattcttttacttcatttggtgtt
aacgctgatggctctccaagttcactggaccctcctgagcaccttttcagaattagactt
gtgtgcactatattggatacctgtggccagtactttgacagaggttccagtaaacgaaaa
cttgattgcttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgacatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacaa
gacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagattcaaaagac
tctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagctgaa
acagaagaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttct
gataacgatgatgatgaaggggaagaagaggaggaagagaatacagattaccttacagat
tctaataaggagaatgaaactgatgaagagaatactgaggtaatgattaaaggaggtgga
cttaagcatgtaccttgtgtagaagatgaggatttcattcaagctctggataagatgatg
ctagaaaatcttcagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgct
attcccttacatctcaaaagccaactgaggaaagggcctccacttggtggtggggaggga
gaagcagagtctgcagatacaatgccatttgtcatgttaacaagaaaaggcaataaacag
cagttcaagatccttaatgtgcccatgtcttcccaacttgctgcaaatcattggaaccag
caacaggcagaacaggaagagagaatgagaatgaaaaagctcacactagatatcaatgaa
cggcaagaacaagaagattatcaagagatgttgcagtctctcgctcaacgcccagctcca
gcaaacaccaatcgggagagaaggcctcgttaccaacatccaaagggagcgcctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
