KEGG   Talpa occidentalis (Iberian mole): 119244724
Entry
119244724         CDS       T07495                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
tod  Talpa occidentalis (Iberian mole)
Pathway
tod04820  Cytoskeleton in muscle cells
tod05169  Epstein-Barr virus infection
tod05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:tod00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119244724 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    119244724 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    119244724 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tod03019]
    119244724 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tod04812]
    119244724 (VIM)
   04147 Exosome [BR:tod04147]
    119244724 (VIM)
Messenger RNA biogenesis [BR:tod03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     119244724 (VIM)
Cytoskeleton proteins [BR:tod04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     119244724 (VIM)
Exosome [BR:tod04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119244724 (VIM)
  Exosomal proteins of other cancer cells
   119244724 (VIM)
SSDB
Motif
Pfam: Filament Filament_head FKBP15 KIF21A_4th DUF1664 TolA_bind_tri DUF4515 DUF7491 HALZ GeBP-like_DBD RBD-FIP Sec10_N TPR_MLP1_2 CENP-F_leu_zip
Other DBs
NCBI-GeneID: 119244724
NCBI-ProteinID: XP_037366573
LinkDB
Position
Unknown
AA seq 462 aa
MSTRSMSSSSYRRMFGGPSTSSRPSASRSYVTTSTRTYSLGSSLRPSTSRSLYTSSPGGV
YATRSSAVRLRSGVPGLRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKGRVEVERDNLAE
DIMRLREKLQEEMLQREDAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVGIFKSELE
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgtccaccaggtccatgtcctcgtcctcctaccgcaggatgttcggtggccccagcacc
tccagccggccgagcgccagccggagctacgtgaccacctccacccgcacctacagcctg
ggcagctcgctgcgccccagcaccagccggagcctctacacctcgtcccccggcggcgtg
tacgccacgcgctcctctgcggtgcgcctgcggagcggggtgcccggcctgcggctgctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaagtggagctgcaggagctcaacgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagcttaagggc
cagggcaagtcccgtctgggggacctctacgaggaggagatgcgggagctgcgcaggcag
gtggaccagctgaccaacgacaaaggccgtgtcgaggtggagcgcgacaacctggccgag
gacatcatgaggctccgggagaagttgcaggaggaaatgcttcaaagggaagatgccgag
agcaccctgcaatctttcagacaggatgttgacaatgcttcgctggcacgtcttgacctt
gaacgtaaagtggaatccttgcaggaagagattgcctttttgaagaaactacatgatgaa
gaaatccaggagctgcaggcccagattcaggaacagcatgtccagatcgatgtggatgtt
tccaaacctgacctcactgctgctctgcgtgatgtgcgtcagcagtacgaaagtgtggct
gccaagaaccttcaggaggccgaggaatggtacaagtcgaagtttgctgacctctccgag
gctgctaacaggaacaatgatgccctgcgccaggcaaagcaagaatcaaatgagtatcgg
agacaggtgcagtccctcacttgtgaagtggatgcgcttaaaggaactaatgagtctctg
gaacgccagatgcgtgaaatggaagagaactttgctgtcgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaatatgaaggaagaaatggctcgacatctt
cgtgaataccaagacctgctgaatgtcaagatggctcttgacatcgagattgccacctac
aggaagttgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggaatccctccctcttgttgacacccactcaaagaga
acacttctgattaagacggttgaaactagagatggacaggttggtatctttaaatcagaa
ctggagtaa

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