Talpa occidentalis (Iberian mole): 119244724
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Entry
119244724 CDS
T07495
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod04820
Cytoskeleton in muscle cells
tod05169
Epstein-Barr virus infection
tod05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119244724 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119244724 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
119244724 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119244724 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tod04812
]
119244724 (VIM)
04147 Exosome [BR:
tod04147
]
119244724 (VIM)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
119244724 (VIM)
Cytoskeleton proteins [BR:
tod04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119244724 (VIM)
Exosome [BR:
tod04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119244724 (VIM)
Exosomal proteins of other cancer cells
119244724 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
FKBP15
KIF21A_4th
DUF1664
TolA_bind_tri
DUF4515
DUF7491
HALZ
GeBP-like_DBD
RBD-FIP
Sec10_N
TPR_MLP1_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
119244724
NCBI-ProteinID:
XP_037366573
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSTRSMSSSSYRRMFGGPSTSSRPSASRSYVTTSTRTYSLGSSLRPSTSRSLYTSSPGGV
YATRSSAVRLRSGVPGLRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKGRVEVERDNLAE
DIMRLREKLQEEMLQREDAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVGIFKSELE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtccatgtcctcgtcctcctaccgcaggatgttcggtggccccagcacc
tccagccggccgagcgccagccggagctacgtgaccacctccacccgcacctacagcctg
ggcagctcgctgcgccccagcaccagccggagcctctacacctcgtcccccggcggcgtg
tacgccacgcgctcctctgcggtgcgcctgcggagcggggtgcccggcctgcggctgctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaagtggagctgcaggagctcaacgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagcttaagggc
cagggcaagtcccgtctgggggacctctacgaggaggagatgcgggagctgcgcaggcag
gtggaccagctgaccaacgacaaaggccgtgtcgaggtggagcgcgacaacctggccgag
gacatcatgaggctccgggagaagttgcaggaggaaatgcttcaaagggaagatgccgag
agcaccctgcaatctttcagacaggatgttgacaatgcttcgctggcacgtcttgacctt
gaacgtaaagtggaatccttgcaggaagagattgcctttttgaagaaactacatgatgaa
gaaatccaggagctgcaggcccagattcaggaacagcatgtccagatcgatgtggatgtt
tccaaacctgacctcactgctgctctgcgtgatgtgcgtcagcagtacgaaagtgtggct
gccaagaaccttcaggaggccgaggaatggtacaagtcgaagtttgctgacctctccgag
gctgctaacaggaacaatgatgccctgcgccaggcaaagcaagaatcaaatgagtatcgg
agacaggtgcagtccctcacttgtgaagtggatgcgcttaaaggaactaatgagtctctg
gaacgccagatgcgtgaaatggaagagaactttgctgtcgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaatatgaaggaagaaatggctcgacatctt
cgtgaataccaagacctgctgaatgtcaagatggctcttgacatcgagattgccacctac
aggaagttgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggaatccctccctcttgttgacacccactcaaagaga
acacttctgattaagacggttgaaactagagatggacaggttggtatctttaaatcagaa
ctggagtaa
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