Talpa occidentalis (Iberian mole): 119246173
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Entry
119246173 CDS
T07495
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod04613
Neutrophil extracellular trap formation
tod05014
Amyotrophic lateral sclerosis
tod05034
Alcoholism
tod05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
119246173 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119246173 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119246173 (HDAC6)
09165 Substance dependence
05034 Alcoholism
119246173 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tod01009
]
119246173 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119246173 (HDAC6)
04131 Membrane trafficking [BR:
tod04131
]
119246173 (HDAC6)
03036 Chromosome and associated proteins [BR:
tod03036
]
119246173 (HDAC6)
Enzymes [BR:
tod01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119246173 (HDAC6)
Protein phosphatases and associated proteins [BR:
tod01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119246173 (HDAC6)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119246173 (HDAC6)
Membrane trafficking [BR:
tod04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119246173 (HDAC6)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119246173 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
119246173
NCBI-ProteinID:
XP_037368323
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MEKRSSGPLGPPGRRESLCASPGRSLRKGQGTNRGRGEVSPTMTSHGQDSTTIRQRRSRH
NPHSPPQDSSITSKRGIKKGAALHSSPNLAEVKKKGRMKKLSQATEQDLVVGLQGLDLNL
EAKILSGTGLVFDEQLNEFYCLWDDSFPECPERLHAIKEQLIQEGLLNRCVSFQARFAEK
EELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAV
LGAEIRNAMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHGIKRVLIVDWDVHHGQ
GTQFAFDKDPSVLYFSVHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDAD
YIAAFLHILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGRL
ILSLEGGYNLCSLAEGVSASLHILLGDPCPMLESPGAACPSAQTSISYTLDALEPFWEVL
VRPVETLEEVNIEGIYMEKKKAAEPWHPPELPVLKWPVLQPRTGLVYDHRMMDHYNLWDS
HHPEMPQRVSRIMCRLEELGLVGRCLTLPARPATDAELLTCHSMEYVDRLRSTEKMKARE
LHREGANFDSIYICPGTFACAQLAAGSACELVEAVLSGKVLNGVAVVRPPGHHAEPDAAC
GFCFFNSVAVAARHAQTISGRALRILIVDWDIHHGNGTQRIFEDDSSVLYISLHRYDHGT
FFPMGDEGSSSQMGRAAGTGFTVNVAWNGPRVGDADYLTAWHRLVLPISYEFNPELVLVS
AGFDAARGDPLGGCQVSPEGYAHLTHLLMGLAGGRIILVLEGGYNLTSISESMAACTRTL
LGDPLPLLTLPRPPLSGTLTSISETIHIHRRYWCSLRVMKTDDKEVPSTYMLITKNTSQP
AEPDSHEGVTVPRGGDILETGMGKTTSTSSVEESTAGQTKSETAVVQLTQDQSLETATGE
ATLDQTPSETAMGETMLGQTAPALYTNNETPPTSPVQGATPLLSPSELIGNLRALELGKK
TQEVLESQNPEEESLPGGVTGGQDMNDSVLMQAFGSHADTDQPTFYAVTPLSWCPHLEFI
CPVPAAGLDVTQPCQDCGMHQENWVCLSCYQVYCGRFINAHMLQHHEASGHPLVLSYVDL
SAWCYYCEAYVHNQALLESKNIAHQNKFGEDMPHAH
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaggagctcaggccccctcggccccccaggtcgccgggaatctctttgcgcg
agtcctgggcggagtttgagaaaggggcagggcactaaccgcggcaggggtgaagtctcc
ccgaccatgacctcccacggtcaggattccaccaccatcaggcagcgaaggagtaggcac
aacccccactctccccctcaggactccagcatcacctcgaagcgaggtattaaaaagggt
gctgcactccactccagccccaatctagcagaggtaaagaagaaaggcagaatgaagaag
ctcagccaagcgaccgagcaagacctagtcgtggggctgcaaggactggatctgaacctt
gaggccaagatactgtctggcactggcttggtgtttgatgaacagctaaatgaattctac
tgcctctgggatgacagcttccctgaatgccctgagcggctccatgccatcaaagagcag
ctcatccaggagggcctcctcaaccgttgtgtgtcctttcaggcccggtttgctgagaag
gaagaactgatgttggttcacagcctggaatacattgatctgatggagacgactcagtac
atgaatgagggggaactccgcattctagcagacacctatgactcagtttatctacatccg
aactcatacacctgtgcctgcttggcctcaggctccgtcctcaggctggtagatgcagtt
ctgggggctgagatccggaacgccatggccatcgtcaggcctcctggacaccatgcccag
catagtctcatggatgggtattgcatgttcaaccatgtggctgtggctgcccgctatgcc
caacagaagcatggcataaagagggtccttatcgtggattgggatgtgcaccatggtcag
gggacacagtttgcctttgacaaggatcccagtgtcctgtatttctcagtccaccgctat
gaacatggtcggttctggccccaccttaaggcctctaactggtccaccacaggttttggt
caaggtcagggatatactatcaatgtgccttggaaccaggtggggatgcgagatgctgac
tacatcgctgctttcctgcacattctgctgccagtggcccttgagtttcagccccagctg
gtcttggtagctgctggatttgatgcacttcaaggggaccccaagggggagatggccgcc
actccagcaggctttgcccagctaacccacttgctcatgggcctggcaggaggcaggctg
atcctgtctctggagggtggctacaacctctgctctctggctgagggtgtcagtgcctcc
ctccacatacttctgggagacccttgccccatgctggagtcccctggcgctgcttgccca
agtgcccagacatcgatctcctatactctggatgccctggaacccttctgggaggtcctt
gtaagaccagttgagaccctggaggaggtcaacatagaggggatctacatggagaagaag
aaggcggcggaaccatggcatccccctgagctcccagtcctgaagtggccagtgctgcag
cctcgcacagggctggtctatgaccaccgaatgatggaccactacaacttgtgggacagc
catcacccagagatgccccagcgtgtttcacgtatcatgtgtcgtctggaggagctgggc
cttgttgggcgctgcctcactctgcctgctcgtccagccaccgatgccgaactgctcacc
tgccacagtatggagtatgtggatcgtttacgctccacggaaaagatgaaagcccgggag
ctgcatcgtgagggcgccaactttgactccatctacatctgtcctggcacctttgcctgc
gcacaactggctgctggctctgcctgcgagctggtggaagcagtgctgtcaggaaaggtt
ttgaatggggttgctgtggtgcgccccccaggacaccatgcagagccagatgccgcttgt
ggtttctgctttttcaactctgtggctgtggctgctcgccatgcccagactatcagtggt
cgtgctctgaggatcctgatagtggactgggacatccaccatggtaatggaactcagcgt
atatttgaggacgactccagcgtgctgtacatctccctgcaccgctatgatcatggcacc
ttctttcccatgggagatgaaggttccagcagccagatgggcagggctgctggcacaggc
ttcactgtcaatgtggcctggaatgggccccgcgtgggtgacgctgactacttaactgcc
tggcatcgtctagtgctccccatttcctatgagtttaatccagagctggtgctagtctca
gctggctttgacgctgcacggggggatcctttgggaggctgccaggtgtcacccgagggc
tatgcccacctgacccacctgctgatgggcttggccggtggccggattatcctagtccta
gagggtggctataacctgacctccatctcagagtcgatggctgcctgcacccgcaccctc
ctaggggacccactgcccctactgaccctgccacggcccccactatcagggaccctgact
tcgatctctgagaccatccacatccatcgcagatactggtgcagcttacgggttatgaag
acagatgacaaagaggttccctccacttacatgttaatcaccaagaatacatcccaacct
gctgaacctgactcacatgagggggtaaccgtgccaagaggaggggacattctggaaaca
ggcatggggaagaccacttcaacatcatctgtggaagagtccactgcaggtcagactaag
tcagagacagctgtggtgcagctcactcaggaccagtccttggagacagccacgggggaa
gccacactggaccagaccccctcagagacagccatgggggaaaccatgcttggccagacc
gctccagccttgtatactaacaacgagactcccccaacttcacccgtgcaaggagccaca
cccctgttatcccccagtgagctgattgggaacctcagggctttggaactaggcaagaaa
actcaggaagtcctagagtcccagaacccagaagaggagagtctaccaggaggcgtgact
ggaggtcaggacatgaatgattccgtgctaatgcaggcctttgggagccatgctgatact
gaccagcccacattttatgctgtgacaccactgtcctggtgtccccatttggagttcata
tgccctgtacctgcggcaggcctagacgtgacccaaccttgtcaggactgtggaatgcac
caggagaattgggtgtgtttgtcttgctatcaggtctactgcggtcgtttcatcaacgcg
catatgctccaacaccacgaagcctcaggacatcctctggtactcagctatgttgacctg
tctgcctggtgttactactgtgaagcctatgtccacaaccaggctctgctagagtcaaag
aacatcgcccaccagaacaagtttggggaggatatgccccatgcacactaa
DBGET
integrated database retrieval system
