Talpa occidentalis (Iberian mole): 119246218
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Entry
119246218 CDS
T07495
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod04622
RIG-I-like receptor signaling pathway
tod05161
Hepatitis B
tod05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119246218 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119246218 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
119246218 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119246218 (DDX3X)
03041 Spliceosome [BR:
tod03041
]
119246218 (DDX3X)
03036 Chromosome and associated proteins [BR:
tod03036
]
119246218 (DDX3X)
Enzymes [BR:
tod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119246218 (DDX3X)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119246218 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
119246218 (DDX3X)
Spliceosome [BR:
tod03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119246218 (DDX3X)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119246218 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119246218
NCBI-ProteinID:
XP_037368407
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEEVDKRSFLLDLLSATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNDRNSNITKDLLDLLVEAKQEVPSWLESMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagccagcaaagggcgctatattccc
cctcacttaaggaaccgagaggctactaaaggattctacgataaagatagttcagggtgg
agttccagtaaagataaggatgcatacagcagttttggatctcgtagtgattcaagaggg
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cgcagtgactatgatggcattggcagccgtggggacagaagtggttttggcaaatttgaa
cgtggtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactt
ccaccaagtgaacgcttggaacaggaactcttttctggaggcaacactgggattaacttt
gagaaatatgatgacattccagttgaggcaacaggcaacaactgtcctccacacattgaa
agtttcagcgatgttgagatgggagaaattattatgggaaacattgagcttactcgttac
actcgcccgactccagtgcagaagcatgctattcctattatcaaagagaagagagacttg
atggcttgtgcccaaacagggtctggaaaaactgcagcttttctcttgcccattttgagt
cagatttattcagatggtccaggagaggctctgagggccatgaaggaaaatggaaggtac
gggcgccgcaaacaatacccaatctccttggtgttagcacctactagagaattagcagtc
caaatctatgaggaagccaggaaattttcataccgatctagagttcgcccttgtgtggtt
tatggtggtgctgacattggtcagcagattcgagacttagaacgtggatgccacttgtta
gtagccactccaggacgtctagtggatatgatggaaagagggaagattggattagacttc
tgcaaatatttggtcttggatgaagctgatcggatgttggatatgggatttgaacctcag
atacgtagaatagttgaacaagatactatgccaccaaagggagttcgccacactatgatg
tttagtgctactttccctaaggaaatacagatgcttgctcgtgatttcttggatgagtat
atctttttggctgttggaagagtaggctctacctctgagaacattacacagaaagtagtt
tgggtggaagaggtagataagcgttcatttctgcttgaccttctaagtgcaacaggcaag
gattcactgaccttagtatttgtggagaccaaaaagggtgcagattctctggaggatttc
ttataccatgaaggatatgcttgcaccagtatccatggagaccgatctcagagagataga
gaagaggcccttcaccagttccgctcaggaaaaagtccaattttagtggctacagcagtg
gcagcaagaggattggacatttcaaatgtgaaacacgttatcaattttgacttgccaagt
gatatcgaagaatatgtacatcgcataggccgcacaggacgtgtaggaaaccttggtctt
gccacctcattctttaatgataggaactccaatattaccaaggatttgttggatcttctt
gttgaagctaaacaggaggtgccatcttggttagaaagcatggcttatgaacatcactac
aagggtagcagtcgtggacgatctaagagcagtagattcagtgggggatttggtgccaga
gactatcgacaaagtagtggtgccagcagttccagtttcagcagcagccgtgcaagcagc
agtcgcagtggtggaggcggccatggtagcagcagagggtttggtggaggtggatatgga
ggcttttacaacagcgatggatacggaggaaattataactcccagggggttgactggtgg
ggtaactga
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