Talpa occidentalis (Iberian mole): 119246948
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Entry
119246948 CDS
T07495
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tod04121
]
119246948 (PDZRN4)
Enzymes [BR:
tod01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119246948 (PDZRN4)
Ubiquitin system [BR:
tod04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
119246948 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
Sina_ZnF
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-rbx1
zf-RING_6
PDZ_Tricorn
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119246948
NCBI-ProteinID:
XP_054552270
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGFALERFAEAVDPDFECKLCGQVLEEPLCTPCGHVFCASCLLPWAARRRRCPLQCQLLA
PGELYRVLPLRSLIQKLRIHCDYRARGCSLSVPLRELAAHVERCDFRPGPCLQGGVSGPG
DCRRGDVPAREGGGAPPGDRRGAGGGLPGGGGGSGPGPGVLAWRRREKALLAQLWVLQGE
VQLTVRRYQEKFAQYMAHVRNFARDLGGGHGRGGEHKPFIIVLERENDTLGFNIIGGRPN
QNNQEKKSTEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSRATHEEAVEAFRNAKE
PIVVQVLRRTPLSKPAYLTPPEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLL
SDSCHSLHPMEHEFYEDHEYLSSLPADGDRTEDFEYEEVELCRVSSQEKLGLTVCYRTDD
EEDTGIYVSEVDPNSIAARDGRIREGDRILQINGEDVQNREEAVALLSSDECKRIVLLVA
RPEIQLDEGWLEDERNEFLEELNLEMLEEQHNEATQHTAKEVEQPKKQEEEEGTTDTATS
SSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTFLKSRRELGQSQDTLGSIELQCNE
SFVSGECLDSDCTGHPDEECERFRQLLELKCKIGNHGEYDLYYSSSTIECNQGEQEGVEH
ELQLLNEELRNIELECQNIMQAHRLQKVTEQYGDIWALHDEGFRNYNTSMDMQRGKLDDI
MEHPEKSDKDSSSAYNTAESCRSTPLTLDRSPDSSLPRMINLTNKKNLRSTAAADQSSSG
QSSKDSASTKAKTTEQGCIMACKEKILESKLSDQEKAGSEHTPYLSPYHSSSYRFANIPA
HARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESPKCSEPKMEWKVKIRSDGTRYITKRP
VRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMR
SRLECLKESPQSGSEGKKEINILELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGSR
VHNAFLSVTTV
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgccctggagcgtttcgctgaagccgtggacccggatttcgagtgcaagttg
tgcggccaggtgctggaggagcccctgtgcacgccttgcggccacgtcttctgcgccagc
tgcctgctgccctgggcagcgcggaggcgccggtgcccgctgcagtgccagctcctggcg
ccgggcgaactgtaccgggtgctgcctctgcgcagcctcatccagaagctgcgcatccat
tgcgattaccgcgcgcgcggctgcagcctctccgtcccgctgcgcgagctggccgcgcac
gtcgagcgctgcgactttcgccctggcccctgcctccagggcggcgtctcgggacccggc
gattgccgccgcggggacgtgcccgcgcgggagggcggcggagccccgccgggagaccgc
aggggcgcgggcggggggctgccgggcggcggcggcgggagcgggccggggcctggcgtc
ctcgcctggaggcggcgcgagaaggcgctgctggcgcagctctgggtgctgcagggcgag
gtgcagctcacggtccgcaggtaccaggagaagttcgctcagtacatggctcacgtccgc
aacttcgccagggacctgggcggcggccacggccggggtggagaacataagccattcatc
attgtgttagaaagagaaaatgacaccttgggattcaatataataggagggcgaccaaat
cagaataatcaggaaaaaaaatcaacagaaggaatttatgtgtcaaaaattctggaaaat
ggacctgctgacagagccgatggcctggagattcatgacaaaatcattgaggtcaacggg
aaggatctgtcaagggccacccatgaggaggcagtggaagcctttcgcaatgccaaggag
cccattgtggtccaggtgctaaggcgaacacctctcagcaagccagcctacttgacaccc
cccgaggtgcagctcatgaacgccagcacccagacggacatcaccttcgagcatatcatg
gcgctggccaagctcaggcctcccactccaccagtgcccgacatctgtccctttctgctc
tcagacagctgccattctcttcatccaatggagcatgagttttatgaagaccatgagtat
ctttccagtttacctgctgatggagacagaaccgaagactttgaatatgaggaggtcgag
ttatgtcgtgttagcagtcaagaaaagctgggcctgacagtctgttaccgaacagatgat
gaagaagacactggcatttatgtcagcgaggttgatccaaacagcattgctgcaagagat
ggccgaattcgagaaggggatcgtattctgcaaataaatggggaagatgtccagaatcga
gaagaagcagtggcattgctgtctagtgatgagtgcaaaaggattgtgctgttggttgcg
aggccagagatccagctggatgaaggctggctggaagatgaaaggaatgagttcttagag
gagttaaacttggagatgctggaagaacagcataatgaagccacgcagcacacggccaag
gaggtggagcagccaaaaaaacaagaagaagaagaaggtaccacagacacagccacatcc
tcatccaataaccatgagaaggacagtggtgttgggcgcacagatgaaagcttaagaaac
gatgagagctcagagcaagagaatgcagctgaggaccccaacagcacatttttgaagagc
aggagagaactggggcagagccaagacacgctgggaagcattgaacttcagtgcaacgag
agcttcgtgtctggtgaatgcctagactcagactgcactggccacccagacgaggagtgt
gaaagattccggcagctcttggagctcaagtgcaagattggaaatcatggcgagtatgac
ctgtattactcgagcagcacaattgaatgcaatcagggggaacaggagggagtggaacat
gagctgcagttgcttaatgaagagctaagaaacattgaacttgagtgtcagaatatcatg
caagctcacaggctccagaaagtgacagagcagtatggagacatctgggcgttgcatgat
gaagggttccgaaattataataccagcatggatatgcaaagggggaaactcgatgacatc
atggaacacccagagaagtcagacaaggacagctctagtgcttacaacacagctgaaagc
tgcagaagcaccccactcactttggaccggtcccccgacagttcccttccaagaatgatc
aaccttaccaacaagaaaaatctgagaagcacagctgcagccgatcagtcctcttctgga
cagagcagcaaagactccgcctccaccaaagccaaaaccaccgaacaaggttgcatcatg
gcgtgcaaggagaagatactggaaagcaagctgtctgatcaggagaaggcaggcagcgaa
cacaccccttacctctctccctaccacagctcctcctacagattcgccaacatcccggca
cacgcccgccactatcagagctacatgcagctcattcaacagaaatcggcagtcgagtac
gcgcagagtcagctcagcttggtgagcatgtgcaaggagtcccctaagtgctcggagcca
aagatggagtggaaggtgaagatcagaagtgacggtacccggtacatcaccaagaggccg
gtgcgagaccgcattctgaaggagcgtgccttaaagatcaaggaggagcggagcggcatg
accaccgacgacgacaccatgagtgaaatgaagatggggcgctactggagcaaagaagag
aggaagcaacatctggtgcgggcgaaggagcagcggaggcgccgagagttcatgatgcgg
agccggctggagtgtctcaaggaaagtccccagagtggcagcgagggcaagaaggagatc
aacatcctcgaactgagtcacaagaagatgatgaagaagaggaacaagaaaatcttggac
aactggatgacaatccaagaactgatgacgcatggagctaaatctcccgacggctcgcgg
gttcataacgccttcttgtcagtcaccactgtatga
DBGET
integrated database retrieval system
