Talpa occidentalis (Iberian mole): 119247236
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Entry
119247236 CDS
T07495
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119247236 (TNRC6B)
03036 Chromosome and associated proteins [BR:
tod03036
]
119247236 (TNRC6B)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119247236 (TNRC6B)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119247236 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
119247236
NCBI-ProteinID:
XP_037369409
LinkDB
All DBs
Position
Unknown
AA seq
1832 aa
AA seq
DB search
MSQPARSSPLWACSPQWTPIRIASGPMTQLPLRFSPCLATCPSITEVSFMKILFASPFIS
SREKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPAAASPIGSSP
SPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGG
GAGPPPSTAPGANPNNAQGTGTLLQSESGTAPESTLGGAAASNYANSTWGPGASSNNGAS
PSPGHIWDKVIVDRSDMEEWPCIASKDTESSSENTTDNNSASNPGSEKSTLPGSTTINKG
KGSQCQSASSGSECNLGVWKSDPKAKSVQSSNSTTDSNNGLGNWRNVSGQGRIGPGSGFS
NFNPNSNPSAWPALVQEGNSRKGALETDNSNSSAQVSTAGQASREQQSKMENAGVNFVVS
GREQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFGMGLGNASRSTDAPSPSTGDRKTG
SVGSWGAARGPSGTDTVSGQSNSGNNGNNGKDREDSWKGASVQKSTGSKNDSWDNNNRST
GGSWSFGPQDSNDNKWGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDN
QKGHPLPENQGNAQAPCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDC
QAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQT
KNSGGWGDAPSQSNQMKSGWVELSASTEWKDPKNTGWNDYKNNNSSSWGGGRPDEKTASS
WNENSSKDQGWGGGRQPSQGWTSGKNGWGEEVDQAKNSNWESSASKPVSGWGEGGQNEIG
TWGNSGSTSLASKGGWEDCKRSPAWTETGRQPNSWNKQHQQQQQPQQPPPPPPETSGSWG
GPPPPPPGNGRPSGSTWSSGPQPVTPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNS
YNYKNVNLWDKNSQGGPAPREPNLPTPMTGKSASVWSKSTPPAPDNGTSAWGEPNESSPG
WGEMDDPGAPTAGWGNAPSNAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVW
NTAGSQGSASSHNSASWGQGGKKQMKCSLKGGNSDSWMNPLAKQFSNMGLLSQTEDNPSN
KMDLSVDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTESGPYFEKGGNHGLFG
NSTAQSRGLHTPVQPLNSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLS
PQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSALQQ
QQQQQQQRQPSMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMD
YGMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKARGGSPYNQFDIIP
GDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVT
PGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAK
FPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRS
VRGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNL
TQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSA
PAAGWQSLETGQTQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSS
LWGVPAVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcctgcccggtcttcccctctgtgggcctgctcacctcagtggactcccatc
aggattgcttctggccctatgacccagcttcctcttcgcttcagtccatgccttgccact
tgcccttccataacagaagtcagcttcatgaaaatactctttgcttctcctttcatctct
tccagagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaa
gaggataaaaagaaaaaagaagccactcagaaggtcacggaacaaaaaaccaaagtgccc
gaagtgacgaaaccaagtctaagccaaccagcggccgccagcccgattggcagctctcca
tcgccaccagtcaacggtggcaacaatgccaaaagggtggcagtgcccaacggacagccg
cccagcgccgcccgctacatgcctcgggaggtgccgccgcgattccgctgccagcaggac
cacaaagtgttactaaaacgcgggcagccccctccaccatcctgcatgctcctcggaggc
ggggcagggcctcctccctccacagcacccggagcaaaccccaacaacgcacaagggaca
ggaacgctgctgcagagtgagagcgggactgcaccagagtcaacccttggaggtgctgct
gcttcaaattatgcaaattccacttggggcccgggagcctcctccaacaacggcgcctcc
cccagcccaggtcacatctgggacaaggtgattgtagacaggtccgacatggaagagtgg
ccttgtattgccagcaaagacactgagtcttcttccgaaaacaccaccgataacaacagt
gcctcgaaccctggctctgagaagagcactctgccaggaagcaccactattaacaaaggg
aaagggagccagtgccagtctgcaagttctgggagcgaatgtaatcttggggtctggaaa
tctgaccccaaggctaaatctgttcaatcttccaactctaccacagatagcaacaatgga
ctaggaaactggaggaatgtgagtggtcaggggagaatcggacctggctctggcttcagc
aacttcaacccaaatagcaacccatctgcctggccagcactggtccaagaaggaaattct
aggaaaggggcattggagacagataatagtaattccagtgcacaggttagcacagcaggt
caggcatccagggaacagcagtcaaagatggaaaatgcgggtgttaattttgttgtctct
ggcagagaacaggctcaaattcataacactgatggaccaaaaaatggaaacactaactcc
ttgaacttaagttcaccaaaccccatggaaaacaagggaatgccctttgggatgggcttg
gggaacgcctccaggagcaccgatgccccttcgccaagcactggagatcgaaagactggg
agtgttggatcttggggtgcagctagggggccttctggaacggacacagtctctggacaa
agcaattctgggaacaatgggaacaatggaaaggatagagaggactcctggaaaggagcg
tctgttcagaaatcaactgggtcaaaaaatgattcttgggacaacaataataggtctacg
ggtgggtcctggagctttggccctcaggactctaatgacaacaagtggggtgaagggaac
aaaatgacatccggggtctctcagggagaatggaaacagccgactgggtctgatgagttg
aaaattggagaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaat
caaaagggccaccccctccctgaaaaccaaggcaatgcccaggctccctgctggggaaga
tcttccagctccacgggaagtgaagttgggggtcaaagcactggaagcaaccacaaagca
ggaagtagtgacagtcataattccggccgccggtcgtataggcccacacatcctgattgt
caggctgtcttgcagactctcttgagccgaactgatttggaccccagggtgctctcaaac
actggctggggccaaactcaaattaagcaggacacagtgtgggacattgaagaggtgcca
aggcctgaggggaaatctgacaaaggaactgaggggtgggagagcgctgccacacagacc
aagaactcagggggctggggagacgcacccagccaaagcaatcaaatgaagtctggatgg
gtggagctctccgcctctacagagtggaaggaccccaagaacacaggctggaacgactac
aagaacaacaactcttccagctggggaggaggacggcccgacgagaagactgcttcctca
tggaatgagaattccagcaaggaccaggggtgggggggtggacgccagcccagccaggga
tggacttctggaaagaatggttggggagaggaggttgatcaagcaaaaaacagcaattgg
gaaagttctgcaagcaaacctgtgtctgggtggggtgaaggagggcagaatgagatcggg
acttggggcaacagtgggagcacaagcctggcttccaaaggcggctgggaagattgcaag
agatccccggcctggaccgagactggcagacagcccaattcctggaataaacagcaccaa
caacagcagcagccacagcagccaccgccaccacctccagagacttctggttcgtggggg
ggcccacccccaccacctccgggcaacggacggccttcgggctccacctggagcagcggg
ccacagccagtaaccccgaaggacgaggagcccagcggttgggaagagccatccccgcag
tcaattagccggaagatggacatcgacgacggcacatctgcgtggggagaccccaacagt
tacaactacaagaatgtgaacctgtgggacaagaattcccaggggggcccagcacctcga
gaaccaaacctgcctaccccaatgaccgggaaatcagcatcagtctggagcaaaagcaca
cctcctgctccagacaatggtacttcagcgtggggtgagccaaacgagagcagtcccggg
tggggtgaaatggatgacccgggagcgccgaccgcgggctgggggaatgcaccctccaac
gctccaaatgccatgaaacctaattctaaatctatgcaagacggctggggggagagtgat
ggccccgtgacgggcactcgccaccccagctgggaagaggaggaggatggaggagtctgg
aacaccgccggctctcagggaagcgcttcctcccacaactcagcaagctggggacaagga
ggaaagaaacaaatgaagtgctcactcaaaggaggaaacagtgattcatggatgaatcct
cttgccaaacagttttcaaatatgggattgctgagtcagactgaagataatccaagcaac
aaaatggatctgtctgtcgataaaaagtttgatgtggacaagcgagcgatgaatctcggg
gattttaatgatatcatgaggaaggatcgatctgggttccgtccacctaattccaaagac
atgggaaccacagagagtgggccttattttgagaagggcggcaatcacggtttgtttgga
aatagcacagcacaatcgagaggcctgcacaccccagtgcagccactgaattcttctcct
aatctccgggcgcaagtgcctccccagtttatttccccccaggtttctgcctcaatgctc
aagcagtttcccaacagtggcctgaatccaggtctcttcaacgtggggccccagttatct
cctcaacaaatcgccatgctgagccagcttccacagattccccagtttcagttggcttgt
cagctccttctgcagcagcagcagcagcaacagctgctgcagaaccagaggaagatttct
caagccgtgcgccagcagcaggagcagcagctggcccggatggtgagcgctctccagcag
cagcaacagcagcagcagcagcggcaaccgagcatgaagcactccccatcacatcccgtt
gggcccaagccacatctggacaacatggtgcccaatgctctgaacgtggggctcccagac
cttcaaaccaaagggccaatacctggatatggttctggcttcagctctggcggcatggac
tacggcatggttggtgggaaggaggctggaaccgagtctcgctttaaacagtggacctcc
atgatggagggactgccctctgtagccacacaggaagccaatatgcacaaaaatggcgct
atagtggcccccggtaaggcccgaggagggtcaccatacaaccagtttgacatcatcccg
ggtgacacgctgggtggccatacgggtcctgctggtgatagctggttacctgccaaatct
ccaccaacaaataaaattggaagtaaatccagcaatgccagttggcctccagaattccaa
ccaggagtgccatggaaaggtatccaaaacatcgaccctgaatctgacccctacgtcacc
ccaggaagtgtgctggggggtaccgccacatctcccattgtagatactgaccaccaactt
ctgcgggataacaccacagggtctaattcttccctcaacacctcgctgccttcacctggt
gcctggccctacagtgcctctgacaactcctttaccaacgttcatagcacttcagcaaag
ttccctgattacaaatcgacatggtccccagatcccataggacacaaccccactcatctc
tccaacaagatgtggaaaaaccatatttcctcaaggaacactacaccgctgccccgcccg
cctcctggtctgaccaaccccaaaccgtcatctccctggagcagcacagcaccccgatcc
gtcagagggtgggggacacaggactcgcggcttgcctcagcctctacctggagcgatggt
ggttcggttcgtcctagttactggctggttcttcacaatctcactccacagattgatggg
tcaaccttgagaaccatctgcatgcagcacggcccactgctgacattccacctgaaccta
acccagggcaccgccctgatccgatacagcaccaaacaggaggcggcgaaggcccagact
gcactgcacatgtgtgtgttgggaaacactaccatcctggctgagtttgccaccgacgat
gaggtcagccgcttcctggcgcaggcgcagccccctacgcccgcagccaccccgagcgca
cccgcggcaggatggcagtcgctggagaccggccagacccagtcagaccctgtcggacct
gctctgaatctgttcggagggtccacggggctcgggcagtggagcagcagcgctggtggc
agcagcggggccgatcttgctggcgcttcgttgtgggggcccccaaactattcttctagc
ttgtggggagtcccagccgtggaagatccccataggatgggcagccctgctcctttacta
cctggtgaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
