Talpa occidentalis (Iberian mole): 119248051
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Entry
119248051 CDS
T07495
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03082
ATP-dependent chromatin remodeling
tod04714
Thermogenesis
tod05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119248051 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119248051 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119248051 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119248051 (SMARCC2)
03036 Chromosome and associated proteins [BR:
tod03036
]
119248051 (SMARCC2)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119248051 (SMARCC2)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119248051 (SMARCC2)
PBAF complex
119248051 (SMARCC2)
GBAF(ncBAF) complex
119248051 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
119248051
NCBI-ProteinID:
XP_037370869
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTEEARAEGQATEEKKEPKEPREGVGAGEEEAKEKASEAPKKDEEKGKEGDSEKE
SERSEGDPAGDAEKEKEPKDGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPQALPPGSQPIPPTGAAGPPPVHSLAMA
PASVAPAPAGSGAPPGSLGPSEQIGQAGSTAVPQQQQPAGAPQPGAIPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGMAGNAPLGLPFGMPPPPPPAPSVIPFGSLADSIGINL
PPPPNLHGHHHHLPFGPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgaaac
gtggaaatgttcatgaccattgagaagtctttggtacagaataattgcctgtcgcgacct
aacatctttctgtgcccagaaattgaacctaaactcctagggaagttaaaggacattatc
aagagacaccagggaacagtcaccgaggataaaaacaatgcctcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtccgaccagtcatgaaaagggataaacag
gttcttctgcactggggctattatcctgatagttacgacacatggatcccagccagtgaa
attgaagcatctgtggaagatgcgccaactcctgagaaacctaggaaggttcacgcaaag
tggatcctggacactgacaccttcaatgagtggatgaacgaggaagactatgaagtaaat
gatgacaaaaaccccgtctcccgccggaagaagatttcagccaagacattgacagatgag
gtgaacagcccggattcagatcgacgggacaagaagggggggaactataagaagaggaaa
cgctccccctccccttcaccaactccagaagctaaaaagaaaaatgctaagaaaggcccc
tcaacaccttacaccaaatcaaagcgtgggcacagagaagaagaacaagaagatctgaca
aaggacatggatgagccctcaccagttccaaatgtggaagaggtgacattgcccaaaaca
gtcaacactaagaaggactcagagtcagccccggtcaaaggaggcaccatgactgacctg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgagaacagtacg
gggaacaagggggagcagaccaagaatccagacctgcatgaggacaatgtgaccgagcag
acccaccacatcatcatccccagctatgctgcctggtttgactataatagtgttcatgcc
attgagcggcgggctctccccgagttcttcaacggcaagaacaagtccaagactccggaa
atctacctggcctatcgaaacttcatgattgacacttaccggctgaacccccaagagtat
ctcacctccaccgcctgccgcaggaacctggcaggtgatgtctgtgccatcatgagggtc
catgccttcctagagcagtgggggctcattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccccccacctcccactttcatgtcttggcggacacgccatcaggg
ctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacatctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaaaccg
accgacatgcagaacttcgggctacgcacagacatgtacaccaagaagaatgtcccttcc
aagagcaaagctgcagccagtgccactcgcgagtggacagagcaggagaccctgctgctc
ctggaggcactggaaatgtacaaagacgactggaacaaagtatcagagcacgttggaagc
cgcacccaggatgagtgcatcttgcattttcttcgtcttcccattgaagacccttaccta
gaggactcagaggcctcgctgggccccctggcctaccagcctatccccttcagtcaatca
ggcaatcctgtcatgagcactgttgccttcctggcatctgtcgttgatccccgagttgcc
tctgctgccgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtgcccaca
gccttggtggaggctcatgttcggaaagtggaagaagcagccaaagtgacaggcaaagca
gatccagcctttggcctggagagcagtggcattgcagggaccacctctgatgagcctgag
cggattgaggagagtgggactgaagaggcgcgggcagagggccaggccacggaggagaag
aaggagcccaaggagccccgagaaggagttggggctggcgaggaagaagcaaaggaaaaa
gccagcgaggcgcccaagaaggatgaggagaaggggaaggagggcgacagtgagaaggag
tcagagaggagcgagggggacccggcaggtgacgctgagaaagagaaggagccgaaggac
gggcaggaggaagtgctgaaggaagtggtggagtcggagggagaaaggaagacgaaggtg
gagcgcgacatcggggagggcaatctctccactgccgccgccgccgccctggctgccgcc
gccgtgaaggccaagcacttggctgctgttgaggagaggaagatcaagtccctggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaactccggcactttgaggagttg
gagacgatcatggaccgggagcgagaagcactggagtaccagaggcagcagctcctggca
gacagacaggccttccacatggagcagctgaaatatgctgagatgcgggcccggcagcag
cacttccagcaaatgcaccaacagcagcagcagccgccgcaagccctgcccccgggctcc
cagccgatcccacccacgggagctgctgggccacccccagtccacagcctggctatggct
cccgcctctgtagcccctgcgcctgctggcagtggggccccgcctggaagcttgggccct
tctgaacagatagggcaggcaggatcaacggcagtgccacagcaacagcagccagctgga
gccccccagcctggggcaatcccaccaggggtacccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctccatgatgccgggggcagtgccaggcagcggg
cacccaggcatggcgggtaatgctcctttgggtttgccgttcggcatgccgcctcctcct
cctcctgctccatccgtcatcccattcggtagtctagccgactccatcggtattaacctc
ccccctcctcctaacctgcatgggcatcaccaccatctcccgtttggcccgggcaccctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccgctgccagac
ccaggcacccccctgcctccagaccccacggccccaagcccaggcacggtcacccccgtg
ccacctccgcagtga
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integrated database retrieval system
