Talpa occidentalis (Iberian mole): 119249052
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Entry
119249052 CDS
T07495
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119249052 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119249052 (SF3B3)
03041 Spliceosome [BR:
tod03041
]
119249052 (SF3B3)
03036 Chromosome and associated proteins [BR:
tod03036
]
119249052 (SF3B3)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119249052 (SF3B3)
Spliceosome [BR:
tod03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119249052 (SF3B3)
Complex B
119249052 (SF3B3)
Complex C
U2 SnRNP specific factors
119249052 (SF3B3)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119249052 (SF3B3)
TFTC complex
119249052 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
119249052
NCBI-ProteinID:
XP_037371995
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctacaacttaaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaattgttgtttcccgtgggaaaatcttggagctg
cttcgccctgaccccaacactggcaaagtgcacaccctactaactgtggaagtatttggt
gttatccggtcgctcatggcctttaggttgacaggtggcactaaagactacattgtggtt
ggcagtgactcaggccggattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgtgctgttatgattagtgctattgaaaagcagaaattg
gtgtatattttaaatagagatgctgcagctaggcttaccatttcatctcccttggaggcc
cacaaagcaaacactttagtatatcatgtggttggagtagatgtcggatttgaaaatcca
atgtttgcttgtttggaaatggattatgaggaagcagacaatgatccaacaggggaagcg
gcggctaatacacagcagacacttactttctatgagttagatcttggtttaaatcatgtg
gtccgaaagtacagtgaacctttggaggaacatggcaacttccttatcacagttccggga
gggtcagatggtccgagtggagtgctgatttgctctgaaaactatatcacttacaagaac
tttggtgaccagccggacatccgctgtccaattcctaggagacggaatgacttggatgat
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcaatgttcttc
tttttggcccaaactgagcagggagatatcttcaagataactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtacctgttgctgctgccatgtgt
gtgcttaaaacaggtttcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagacacattcttctttcagccaagaccactcaaaaaccttgtgttggttgatgag
ttggacagcctctctcccattttattttgccagatagctgatctggccaatgaagatact
ccgcagttatatgtggcctgtggtagaggaccccggtcatctctgagagtcttaaggcat
ggacttgaggtatcagaaatggctgtctctgagctacccggtaaccccaatgctgtctgg
actgtgcgtcggcacattgaagatgagtttgatgcctacatcattgtatctttcgtgaat
gccacacttgtgttatctatcggagagactgtagaagaagtgactgactcagggttcctg
ggcaccaccccaaccttgtcctgctccttgttaggagatgatgccttggtgcaggtatat
cctgatggcatccggcacatacgagcggacaagagagtcaatgaatggaagacccccgga
aagaaaaccattgttaaatgtgcagtgaaccagcgacaggtggtgatcgcccttacagga
ggagagctcgtctattttgagatggatccttcagggcagctgaatgagtacacagagcgg
aaggagatgtcagcagatgtggtatgcatgagcctggccaatgtgccccctggagagcag
cggtctcgcttcctggccgtggggctggtggacaatactgtcagaatcatctccctggac
ccctcagactgtttgcaacctctgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggaggcactgagaagcaggatgaactgggagagaggggttctatt
ggcttcctgtacctgaatattggactacagaatggtgtgttgctgagaactgtcctagac
cctgttactggggatctgtcagacacccgtactcggtaccttgggtcccgtcctgtgaag
ctttttcgagtccggatgcaaggacaagaggcagtgttggccatgtccagtcgctcatgg
ttgagctattcttaccaatctcgtttccatcttacccctctgtcttatgagaccctggaa
tttgcatctggcttcgcttcagaacagtgtcctgagggcattgtggccatctccaccaat
actctgaggattttggcattggagaagctaggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcatccaccctgaaagtaacaaccttatcatcatt
gagactgatcacaatgcctatactgaagccacaaaagctcagaggaagcagcagatggca
gaggaaatggtggaagcagcaggtgaggatgagcgggaactggctgcagaaatggcagca
gcattcctcaacgaaaacctccctgaatccatttttggagctcctaaggctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacactggaccttgtc
cagctggaacagaatgaagctgcttttagtgttgccgtgtgcaggttctccaacactggg
gatgattggtatgtgttggtgggtgtggccaaagacctgatcctgaatccccgatctgta
gcagggggctttgtttatacctacaagcttgtgaacaacggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccatcgccccattccaggggagagtattg
attggtgtagggaagctcctgcgagtctatgacctggggaagaagaaattactccgaaaa
tgtgagaataagcatattgccaattacatctctgggattcagacaattgggcacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgctacaagcgtaatgagaaccaa
ctcatcatttttgctgatgacacctaccctcgatgggtcactacagccagccttctcgac
tatgacactgtggcaggggcagacaaatttggcaacatttgtgtggtgaggctaccgcct
aacaccaatgatgaagtggatgaagatcccacaggaaacaaagccctctgggaccggggc
ttgctcaatggggcctctcagaaggcagaggtgatcatgaactatcacgtgggggagact
gttttatccttacagaagaccactcttatccctggaggctcagaatcacttgtctatacc
accttgtctggaggaattggcatccttgtcccattcacatcccatgaggaccatgacttt
ttccagcatgtggaaatgcacctgagatctgagcatccccctctgtgtggccgtgaccac
ctcagctttcgatcctattacttccctgttaagaatgtgattgatggagacctctgtgag
cagttcaactctatggagcccaacaagcaaaaaaatgtctctgaagaattggaccgcacc
ccaccagaggtgtccaagaagcttgaggatatccggacccgctatgccttctga
DBGET
integrated database retrieval system