Talpa occidentalis (Iberian mole): 119249207
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Entry
119249207 CDS
T07495
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tod
Talpa occidentalis (Iberian mole)
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tod03036
]
119249207 (TDRD12)
Enzymes [BR:
tod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
119249207 (TDRD12)
Chromosome and associated proteins [BR:
tod03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119249207 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119249207
NCBI-ProteinID:
XP_037372263
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MLKVLVLKIEDPGCFWVIIKGCSTFLDHEVDYQKLNSAMNDFYNSMCQDIEIKPLMLEEG
QVCVVYCQELKCWCRAIIKSIVSSADHYLADCFLVDFAKYIPVKSKNIRVAVEAFMQLPY
RAKKFRLYCTKPVTLQIDVCEDSAEIVPAMKWDSAAIQYFQNILKATTQVEAKLCAVEED
TFEVYLYVTVKNEKVCINDDLVAKNFACYISPVENKHLDPLEKSRLSIKSTSFSNKLNPA
LTLWPMFLQGKDSQGMENSHGLTFLARSLQHPWPKKVVGHLGPAAVTLDKNIKCNMDSLR
DSPKKKSEKKQQCISLKNINKCVESSVYWPTKRGITIYADPDIPAASALCQKPSETSFRL
AEKKDYDEKNGCVKLLQFLNPDPLRVGDISDLQQLQKLKAGAWQPFMVLRNKVEPCLSID
LSPLSADLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCGNDPLLYLPPLLTILQT
EGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYSMSSRPLHPVLLTIGLHKDEAKNMK
LPRGCDVIVTTPHSLMRLLRYQSLLFLRLCHLILDEVEVLFLEANEQMFAILDNFKKNTE
GEERESVPHQIVAVGAHWNRHIEHLMKEFMNDPCVVITAMEEAALYGSVQQIVHLCLECE
KTSTLLQTLDFIPSQAQKTLIFTCSVAETEMVCKVVESSSIFCLKMHKEMIFNLKSILEQ
WKKKLSSGSHIVLALTDDCIPLFTITDATCVIHFSFPSSPKIFGGRLYCMSDNFQSLTEQ
GSPAEQGDKKAKSILLLTERNACHAVGILRYLERADAKIPAELYEFTAGVLEAKEDRKAK
RPLCPYLKAFGFCKDKRICPDRHHINPELDMPRKFSNQALPTSGYIRVIPFYISNATNYF
GRIVNKNVDLYATLHAEMKEYFEDSNNKTTVEKVEKFGLYGLAEKTLFHRVQVLEMSPKK
EDTWALENVLVKFIDEGRTGLITRDQLLQLPECFHTLPPQAVEFIVCRVKPADNEIEWNP
KVTRYVHHKIIGKLHDAKVILALGNTVWLDPMVHITKLTNLKTSIIDYNVRAEILSMGMG
IDNSDHIEQLKKLYKGAKMPTFEESLSQTLIPDSAEDALSLQRREQENGVSERTAGSETK
SDQKHETLPENTGEDVSTKKTTEPVKSFHPQIKWFQKDDMVILKIRIRNVKDYKCKFSRD
RVVFSAWVGDKFYLADMELQANIIKDDCKCVVKNDEPVITLAKEKREPWYSLLKQRNPNV
AFDFDHWEDCEEDNHFSRVINSKNLSCKVENSNRTSEEDESESD
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagtcctggtgctgaagattgaagatccaggttgcttctgggttatcataaaa
ggatgcagtacctttttagatcatgaagttgactatcaaaagctgaatagtgctatgaat
gacttctataatagcatgtgtcaagatatagaaataaaaccattaatgttggaagaaggg
caggtctgtgtggtttattgtcaagagctaaagtgctggtgcagggctattattaagtca
atagtgtcttcagcagaccattacctggcagactgtttccttgtggattttgccaagtac
attccagtgaaatctaaaaacatccgagttgcagtggaagctttcatgcagcttccctac
agggcgaagaagttcagattgtactgcaccaaacccgttaccttacagattgacgtctgt
gaggacagcgctgaaattgtacctgccatgaagtgggacagtgcagctattcagtacttc
cagaacattctcaaagcaactacccaggtggaagccaaattatgtgctgtggaagaagat
acttttgaggtttacctttacgtaactgtaaaaaatgaaaaagtttgtattaatgatgac
ctggttgcaaagaacttcgcttgttatatatcaccagtggagaataagcaccttgatcct
ttagagaaatcaagattgagtataaagtcaacatccttttctaataagctcaatccagca
cttactctttggccaatgtttttgcaaggaaaagattctcaaggaatggaaaattcacat
ggtttaacttttctggcacggtctctccagcacccatggcccaagaaagttgttggtcac
ctagggccagctgctgtcaccctggataaaaatataaaatgtaatatggattcattgaga
gattcacctaaaaagaaatctgaaaaaaaacaacagtgcatctctttaaaaaatataaat
aagtgtgttgaatcttcggtgtattggccaacaaaaagaggcataaccatatatgctgat
ccagatataccagcagcaagtgctttatgtcagaagccaagtgagacatcgtttagattg
gctgagaagaaagactatgatgagaagaacggctgtgtgaaattattgcagtttttgaat
cctgatccattgagagttggtgacatctctgatttgcagcagttgcagaagttgaaggca
ggtgcatggcagcccttcatggtgctccggaacaaggtggagccctgcctgtccattgac
ttgtcgccactttcagcagacctgaaaaaggctcttcaaagaaacaagtttccaggacct
agccacactgaatcttactcttggcctcccatagcacgtggctgcgatgtggtggtcata
tctcattgtggaaatgaccctttgttgtatcttccgccgctgcttacgatcttacaaact
gagggctgctacaagtcattaccaagtagaaacggacctctggcagtcatcgtgtgccct
gggtggaaaaaggctcagtttatttttgaattattgggagactatagcatgtcctccagg
cctcttcaccctgtgttgttaacaatcggactccataaagatgaagccaaaaatatgaag
cttccaaggggttgtgatgtgattgttacaacaccacatagcctcatgagacttcttaga
tatcaaagcttattatttcttagactctgtcacctaattttggatgaggtggaagtatta
tttcttgaagctaatgaacaaatgtttgctatattagataactttaaaaaaaatactgaa
ggtgaagaaagggaatctgtaccacatcagattgttgcagttggagctcattggaacaga
cacatagagcatttaatgaaagagttcatgaatgacccctgtgttgtgatcacggccatg
gaagaggctgctctctatggcagtgtccagcagatagtgcatctttgcctagaatgtgaa
aaaacctctactttgctccaaacgcttgattttatcccaagtcaggcacagaagacctta
atcttcacctgttctgtcgctgaaacagaaatggtgtgtaaggtagtagaaagcagttca
atattttgcttgaaaatgcataaagaaatgatttttaacttaaaaagtattttagaacag
tggaagaaaaagttaagttctggctctcacattgtcttagccttaactgatgattgcata
cctctctttaccatcactgatgccacgtgtgtgattcacttcagctttccttcctcacca
aaaatttttggtggacgcctatattgcatgtctgataattttcagagtttaactgaacag
ggttctcctgcagaacagggagataaaaaagccaagtcaatcttgttgctgacagagagg
aatgcatgccatgcggtgggcatcctgcgctacttggagcgagcagatgccaagattcca
gcagagctatatgagttcactgctggggttctggaagccaaagaagatagaaaagccaaa
aggcctctttgtccatatcttaaggcttttggtttttgcaaagacaaaaggatctgtcct
gatcgacaccacattaatccagaattagacatgccaaggaagttttcaaaccaagctcta
ccaacatctggatatattagagtaatacccttttatatttccaatgcaacaaactacttt
ggtcgtatagttaataaaaatgtggacctttatgcaactcttcatgctgaaatgaaagag
tattttgaggattccaataataaaacaactgttgaaaaggtggagaaatttggattatat
ggattagcagaaaaaacactttttcacagggttcaggtgttggagatgagccctaaaaaa
gaagacacttgggccctagagaatgtccttgtaaagtttatagatgaaggcaggaccggg
ctcatcacaagggatcaattattgcaacttccagagtgtttccacacgctgcccccgcaa
gctgtggagtttattgtttgtagagtgaaacccgctgacaatgaaattgaatggaatcca
aaggttactaggtatgttcatcacaaaattattggcaagctgcatgatgcaaaagtgata
ctggctctgggaaatacagtttggcttgatccaatggtgcacattacaaaacttacaaac
ttgaaaacttctatcattgattataatgttcgagctgaaattttgtcaatgggaatgggc
attgataattcagaccatatagaacaactgaaaaaattatacaaaggagctaaaatgcca
acttttgaagaaagcctaagccaaaccctgatacctgattcagcagaagatgccctcagt
ttgcagaggagagagcaggagaacggggtgtcagaaagaactgctggctctgagacgaag
tcagaccagaaacatgaaaccttaccagaaaacactggagaagatgtttccactaaaaaa
accacagaacctgttaagagcttccacccacaaataaaatggttccaaaaagatgatatg
gtcatattaaaaataagaataagaaatgtaaaagattataaatgtaaattttctagagat
agagttgttttcagtgcctgggtgggagacaaattttatttggctgatatggagctgcag
gccaacataataaaagatgattgcaaatgcgtagttaaaaatgatgaacctgtaatcact
cttgccaaagagaaaagggagccttggtatagtttactcaaacagaggaatcctaatgtg
gcttttgattttgatcactgggaagactgtgaagaggataaccacttctccagagttata
aattcaaaaaacctgtcctgcaaagttgagaacagtaacagaacttcagaggaggatgaa
agtgagagtgattga
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