Talpa occidentalis (Iberian mole): 119249306
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Entry
119249306 CDS
T07495
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119249306 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119249306 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
tod03019
]
119249306 (SUPT5H)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119249306 (SUPT5H)
RNA polymerase I system
119249306 (SUPT5H)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
119249306 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
119249306
NCBI-ProteinID:
XP_037372443
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDSETVGVIVRLERETFQVLNMCGKLVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFVFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRITSPMHPSAGGQRGGFGSPGGDMSRGRGQRDNELIGQTVRISQGPYKGYIGV
VKDATESTARVELHSTCQTISVDRQRLTTVGSRCPGGMTSTYGRTPMYGSQTPMYGSGSR
TPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDE
PTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQ
PSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGY
NPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVV
SISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGK
LLEA
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaatttctccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaggaaaggcggagtgcagcaggcagtgagaaggaggaa
gagcctgaggaggaagaggaggaggaagaggaggaggagtatgacgaggaggaggaggag
gaagatgatgaccggccccccaagaaaccccgccatggcggctttattctggatgaggct
gatgtggacgatgaatatgaggacgaggatcagtgggaggacggagcggaggacatccta
gagaaagaagagattgaagcttctaatatagataacgtcgtcctggatgaagatcgttct
ggggctcgccgcctgcaaaacctctggagggaccagcgagaagaagaattgggcgagtat
tacatgaagaaatacgccaagtcctctgtgggagagacggtgtacggtggatccgatgag
ctctcagacgacatcacccagcagcagctgctccccggagtcaaggaccccaatctctgg
actgtcaagtgtaagattggggaggaacgcgccacggccatttccttgatgcgcaagttc
attgcctatcagttcacagacacgcccctgcagatcaagtccgtcgtggcgccagagcac
gtgaagggctacatctacgtggaggcctacaagcagacccacgtgaagcaggccatcgag
ggcgtgggcaacctgcggctcggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgctcaaagtggtgaaggaggtcgccaacctgaaacccaagtcctgggtccgg
ctcaagcggggcatctataaggacgacattgctcaggtggattacgtggagcccagccaa
aacaccatctccctgaagatgatccctcgcatcgactatgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaagaggaagaagtttaaacggcctccgcagaggttgttt
gatgccgagaagatcaggtccttgggaggtgacgttgcatctgatggtgacttcctcatc
ttcgaggggaaccgttacagccgaaagggttttctcttcaagagctttgccatgtctgct
gtgatcactgagggagtgaagcccaccctttctgaactggagaagtttgaggaccagcca
gagggcatcgacctggaggtggtgactgaaagcacagggaaggagcgggaacataacttc
cagcctggggacaatgtggaggtgtgtgagggcgagctcatcaacctgcagggcaagatc
ctcagtgtggacggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttccccgcccaggaacttcggaagtacttcaagatgggggaccacgtgaaggtg
atagccggccggttcgagggcgacacgggccttatcgtacgggtggaggagaactttgtc
atcctcttctcggacctcaccatgcacgagctgaaggtgctcccccgcgacctgcagctc
tgctcggagacggcatcgggggtggatgtcgggggccagcatgagtggggggagttggtg
cagctggactctgagactgtgggcgtcatcgtgcgactggagcgggagaccttccaggtg
ctgaacatgtgtgggaagctggtgactgtcaggcaccaggctgtcacccggaagaaggac
aaccgctttgctgtggcgctggactcggagcagaacaacatccacgtgaaagacatcgtc
aaagtcattgacggcccccactcgggccgcgagggcgagatccgccatctcttccgaagc
tttgttttcctgcattgtaagaaactggtggaaaacgggggcatgtttgtctgcaagacc
cgccacttggtgctggctgggggctcgaagccccgggatgtgaccaacttcaccgtgggt
ggctttgccccgatgagcccccggatcaccagccccatgcaccccagcgctggaggtcag
cgtggaggctttggcagcccaggcggcgacatgagcaggggccggggacagagagacaac
gagctcatcggccagactgtgcggatctcccaggggccctacaaaggctacatcggtgtg
gtgaaggacgccacggagtccacagcccgggtggagctgcactccacctgccagaccatc
tccgtggaccgccagcggctcaccacggtgggctcgcggtgcccgggtggcatgacctca
acctacgggcggacgcccatgtatggctcccagacgcccatgtacggctccggctcccgc
acgcctatgtacggttcccagacgccgctccaggatggcagccgcaccccacattatggc
tcgcagacgcccctgcatgatggcagccgcactcctgcccagagtggggcctgggacccc
aataaccctaacaccccatcacgggctgaggaagaatacgagtacgcctttgacgacgag
cccaccccgtccccccaggcctacgggggcacccccaacccacaaacaccgggctaccca
gacccctcctccccgcaggttaacccacagtacaacccgcagacgccaggaacgccagcc
atgtacaacacagaccagttctcgccctacgctgccccttccccacagggctcctaccag
cccagccccagtccccaaagctaccaccaggtggcgcccagcccggctggctaccagaac
acccactcccctgccagctaccaccccacgccatcacccatggcctaccaggccagcccc
agtccgagccctgttggctacagtccgatgacacctggcgctccctcccccggtggctac
aacccgcacacgccgggctcagggattgagcagaactccagcgactgggtgaccactgac
atccaggtgaaggtgcgggacacctacctggatacacaggtggtagggcagaccggtgtc
atccgcagtgtcacgggaggcatgtgctccgtgtatctgaaggacagtgagaaagtggtc
agcatctccagtgagcacctggagcccatcacccccactaagaacaacaaggtgaaggtg
atcctgggtgaagatcgggaagccaccggggtcctgctgagtatcgacggtgaggacggc
atcgtccgcatggacctcgacgagcagctcaagatcctcaacctccggttcctggggaag
ctcctggaggcctga
DBGET
integrated database retrieval system
