Talpa occidentalis (Iberian mole): 119249609
Help
Entry
119249609 CDS
T07495
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
119249609 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119249609
NCBI-ProteinID:
XP_037372930
LinkDB
All DBs
Position
Unknown
AA seq
2148 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGLRGTRGRGSGTPGSLASIRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KRFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGVADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGASKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGATSSGAAGPTSGPQGQPPPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEETKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMEYEQQPPPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPA
PGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPY
LAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSHRGSPFNPGSSS
THPASSPSSFDGPSLPETRLGSREKSLYHSGPLPPPHHHPPHHHHHHVPPPQPHHHHAXP
PHPPEMETGGSPDXPPPRLALGPQPSLRGWRGGGPSPTPGAASPSHHASGAGGGGSAQAP
ALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKAGGLPPAASPTSPASPQP
PPAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPAQPEPAGGGGSSAPSPAPAAS
PASPAPSPVPAPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFLSTDAGDE
DGEGGLGAGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGGAAYGAYGAARAYGGGGGSSA
FTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGAPPPPPRPPSPRYEVP
PPAPHHHAPHAHHEPVLRLWGAAPPDPARRELGYRPGLGGQEKALSASPPAARRSLLHRL
PPAAPGVGPLLLQLGPEPPAPHPAASKAWRAGAAEEPERLPLHVRFLENCQPRAGGAAGR
GPPAEDGPGVPPPSPRRALPPSPTXPRGGEENGLPLLVLPPPAPSVDVEDGEFLFVEPLP
PPLEFSNSFEKPESPLTPGPPLPLPDPPTPTAPLPPGPPPAVAAAPPALDSTASSLTSYD
SEVATLTQGAPGAPGDPLLRGPXGPAAPPPPAPQPGPDPPPGTDSGIEEVDSRSSSDHPL
ETISSASTLSSLSAEGGGAGAGGGAGGAGVAAGPELLDTYVAYLDGQAFGGSGXPGPPYP
PQLMTPSKLRGRALGAAGGLRPSPGGGLREPVTPTSPTVSVTGAGADGLLALSGCAGPSP
AGVAGGPGNVEPEGPPVPLPAASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASALATVKA
SIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYVPERTSSLQRQRLSDDS
LLSKPVSSLFQNWSKPPLPPLPTGTGVPPSAAAAQGATSPSGSSSSTRHLQGVEFEMRPP
LLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPV
FVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLA
EHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgccacaagcgaggacgaggagcgacacagcgccagcgagtgtccc
gagggcggctcggagtccgacagctccccagacgggccagggagaggcctccgggggacc
cggggccggggcagcgggacacctggtagcctggcctccatccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttcaggatcggcatcccc
gacctgcaccagacaaaatgcctgcgcttcaaccccgatgccaccatctggacggccaag
cagcaggtgctctgcgccctgagcgagagcctgcaggacgtgctcaactatggcctgttc
cagcccgccacctcgggccgcgacgccaacttcctggaggaggagcgcctgctgcgggag
tacccccagtccttcgagaagggggtgccctacctggagtttcgctacaagacccgcgtt
tacaaacagaccaacctggatgagaagcagctggcaaagctgcacacgaagacggggctg
aagagattcctggagtacgtgcagctcgggacgtctgacaaggtggcacggctgctggac
aaggggctggaccccaattatcatgactccgactcaggagagacccccctgacgctggct
gcccagacggaaggctccgtggaggtgatccggacgctgtgcctgggcggcgcgcacatc
gacttccgggcccgggacggcatgaccgccctgcacaaggccgcctgcgcccggcactgc
ctggccctcacggcactcctggacctcgggggctcccccaactacaaggaccgcaggggg
ctgacccctctgttccacacggctatggtggggggcgacccccgctgctgtgagctgctg
ctgtacaacagggcccagctgggtgtcgctgacgagaacggctggcaggagatccaccag
gcctgccagcggggccactctcagcacctggaacacctgctcttctacggggctgagccc
ggcgcccagaacgcctcggggaacacggccctgcacatctgcgccctctacaacaaggag
acttgtgctcggatcctcctgtatcgcggagccagcaaggacgtgaagaataacaacgga
cagaccccgtttcaggtggcagtgattgctgggaattttgaactgggggagctgatccgg
aaccatcgggaacaggacgtggtgcccttccaggagtcccccaaatacgcggcccgccga
cgggggcccccgggcgcagggctgacagtgcccccggccctgctgcgggccaacagcgac
accagcatggcgctgcccgactggatggtcttcgctgccccgggggccacttcctccggg
gccgctggccctacctcagggccccagggccagccaccgccctcggcccccagcactaag
ctcagcagcgggacccttcgaagtgccagcagccccaggggtgcccgggcccgatcccca
tcccgagggaggcacccggaggagaccaagaggcagccgcgcgggcggcccagctccagt
gggacgccccgggaagggcctgccggtggcactgggggctcggggggccctgggggctcc
ctgggcagccgcggcaggcgcaggaagctctactcggcggtgccggggcgctccttcatg
gccgtcaagtcctaccaggcccaggccgagggcgagatctccctgagcaagggggagaag
atcaaagtgcttagtatcggagaaggcggcttctgggaaggccaggtcaaaggtcgcgtt
ggctggttcccctctgactgcctggaggaggtggccaaccgctcgcaggagggaaagcaa
gaaagccgcagtgacaaagcaaagagactgttccggcactatactgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcattaag
gagaagacagttttgctgcagaagaaggacagcgagggctttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccacgccggccttcccggcgctgcag
tacctggagtccgtggacgagggcggcgtggcatggcgagccgggctgcgcatgggagac
ttcctcatcgaggtgaacgggcagaacgtggtgaaggtgggccaccgccaggtggtgaac
atgatccgccaaggcggcaacacgctcatggtcaaggtggtcatggtcaccaggcacccg
gacatggatgaggccgtccacaagaaagcaccccagcaggcaaagcgactcccgccccca
gccatctccctgcgttccaagtccatgacctcagagttggaggagatggagtatgagcag
cagccgccgccggtgcccagcatggagaaaaagcggaccgtgtaccagatggctctcaac
aaactggacgagattttggccgcagctcagcagaccatcagtgccagtgagagtcccgcg
cccggtggcctcgcctccctgggcaaacaccgacccaaaggcttctttgccactgagtca
agcttcgatccccaccaccgctcccagccgagttatgaacgtccttcgtacctgcctccg
ggccccgggctcatgctccgccaaaaatccatcggggctgcggaagatgacagaccctac
ctagcaccccccgccatgaagttcagccgcagcctgtctgtgcctggttcggaggacatc
cccccgccgcccaccacgtccccacccgagcccccctacagcacaccccccgccccctcc
tcctccggccgcctcaccccctcccaccgggggagccccttcaaccccggctccagtagc
acccaccccgcctcttccccctcatccttcgacgggccctcccttcccgagacgcgcctg
gggagccgcgagaagagcctgtaccacagcggccccctgcccccgccccaccaccacccg
ccccatcaccaccaccaccacgtgccgcccccccagccccaccaccaccacgccnccccc
cctcaccccccggagatggagaccggcggctcccccgacngacccccgccccgcctggcg
ctggggccccagcccagcctgcgcggctggcgaggcggcgggcccagcccgaccccgggg
gccgcgtccccgtcgcaccacgccagcggggccgggggcggcggctcggcccaggcgccc
gccctgcgctacttccagctgccccctcgggcggccagcgcggccatgtacgtgccggcc
cgctcggggcgcgggcgcaagggcccgctggtcaagcagaccaaggtggagggcgagccc
cagaaggccggcggcctcccgcccgccgcctcgcccacgtcccccgcgtccccgcagccg
ccgcccgccccgtcggagaagaactccatccccatccccaccatcatcatcaaggccccg
tccaccagtagcagcggccgcagcagccagggcagcagcaccgaggcggagccccccgcc
cagcccgagcccgcgggcggcggcggctcctccgcgcccagccccgccccggccgcgtcg
cccgcgtcgcccgcgccctcgcccgtgcccgccccggcctcgcccagcggccccgccacc
ctcgacttcaccagccagttcggggccgccctggtgggcgcggcgcgcagggagggcggc
tggcagaacgaggcccgccggcgctccacgctcttcctctccaccgacgccggcgacgag
gacggcgagggcgggctgggcgcgggcgcgcccccgggcccgcggctgcgccactccaag
tccatcgacgagggcatgttctcggccgagccctacctgcgcctggagtccgcgggcggc
gccgcctacggggcctacggggccgcgcgcgcctacgggggcggcgggggcagcagcgcc
ttcaccagcttcctgccgccgcggcccctggtgcacccgctgaccggcaaggccctcgac
cccgcctcgccgctcgggctggcgctggccgcgcgggagcgcgcgctgaaggagtcctcg
gagggcggcggcgcgcccccgcccccgccccggccgccgtcgccgcgctacgaggtgccg
ccgcccgcgccccaccaccacgcgccccacgcgcaccacgagccggtgctgcgcctctgg
ggggccgcgccgcccgaccccgcgcgccgcgagctggggtaccggcccgggctgggcggc
caggagaaggcgctgtcggccagcccgcccgccgcgcgccgctcgctgctgcaccgcctg
ccgcccgccgcccccggggtggggccgctcctgctgcagctggggcccgagccccccgcc
ccgcaccccgccgcgagcaaggcctggcgcgccggcgccgcggaggagcccgagcggctg
cccctgcacgtgcggttcctcgagaactgccagccccgggcgggcggcgcggcgggcagg
gggccgccggcggaggacgggccgggggtcccgccgcccagcccccgccgcgcgctgccg
ccctcgcccacgntcccgcggggcggcgaggagaacgggctcccgctgctggtcctgccg
ccgcccgcgccctcggtggacgtggaggacggcgagttcctcttcgtggagccgctgccc
ccgcccctggagttctccaacagcttcgagaagcccgagtcgcccctcacgccggggccg
cccctcccgctgccggaccccccgacccccaccgccccgctgccgcccgggccgcccccc
gccgtcgccgccgccccgcccgccctggactccaccgcgtccagcctgacgtcctacgac
agcgaggtggccacgctgacccagggggcccccggggctcccggggaccccctcctccgg
ggcccgnncggccccgccgccccgccgccccccgcgccgcagcccggcccggacccgccg
cccggcacggactcgggcatcgaggaggtggacagccgcagcagcagcgaccacccgctg
gagaccatcagcagcgcgtccacgctcagcagcctgtccgcggagggcggcggggcgggc
gcgggcggcggcgccgggggcgccggggtggccgctgggccggagctgctggacacgtac
gtggcttacctggacggccaggccttcggggggagcggcnccccgggcccgccctacccc
ccgcagctcatgactccctctaagctccggggccgcgccctgggggccgccggagggctg
cggcccagcccgggcgggggcctgcgagagcccgtcacccccaccagccccacggtctcg
gtgaccggcgccggggcggacgggctgctggccctgagcggctgcgctggaccctcgccg
gcgggtgtggccggggggccggggaacgtggaaccagaaggcccaccggtgcccttgccg
gcggcctcctccctgcctcggaagctgctgccctgggaggagggcccgggcccgccgcca
ccacccctgcccgggcccctggcccagccccaggcctcagccttggccaccgtcaaagcc
agcatcatcagcgaactcagctccaagcttcagcagtttgggggctcctcggcagctggg
ggcgctttgccctgggcccggggaggcagcgggggcagcggggacagccaccacggggga
gccagctacgtccccgagaggacctcctccctccagcggcagagactcagcgacgactcg
ctcctctccaagcctgtcagcagcctgtttcagaactggtccaaaccacctctgccgcca
ctccccacaggaaccggggtgcccccttcagctgctgcagcccagggggccacctcgccc
tcgggctcctcctcctccacccgccacctccagggtgtggagttcgagatgcggccgcct
ctgctccgccgggcccccagcccctccctgctgcccgcctcggagcacaaggtcagcccg
gcaccccggccctcgtccctgcccatcctgccttctggacccctctacccgggccttttt
gacatccgcggctcccccaccggaggcgccggcggctccgcggatcccttcgctccagtc
tttgtgccgccgcaccccgggatctccggggggctcggcggagccttgtcgggggcctcc
cgctccctctcgccgacccgcctgctttcgctgcccccagacaagccctttggcgctaag
cctctggggttctggaccaagttcgacgtggccgactggctggagtggctgggcctggct
gagcaccgggcccagttcctggaccacgagatcgacggctcccacctgcccgccctcacc
aaggaggactacgtggacctgggcgtgacccgggtgggccaccgcatgaacatcgaccgg
gcgctcaaatttttcctggagaggtga
DBGET
integrated database retrieval system
