Talpa occidentalis (Iberian mole): 119249879 Help Entry 119249879         CDS       T07495                                  Symbol IGHMBP2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism tod  Talpa occidentalis (Iberian mole) Brite KEGG Orthology (KO) [BR:tod00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:tod03009]     119249879 (IGHMBP2)    03012 Translation factors [BR:tod03012]     119249879 (IGHMBP2) Enzymes [BR:tod01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      119249879 (IGHMBP2)     5.6.2.5  RNA 5'-3' helicase      119249879 (IGHMBP2) Ribosome biogenesis [BR:tod03009]  Eukaryotic type   Other ribosome biogenesis factors    119249879 (IGHMBP2) Translation factors [BR:tod03012]  Eukaryotic type   Initiation factors    Initiation associated factors     119249879 (IGHMBP2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 R3H AAA_19 zf-AN1 Viral_helicase1 AAA_16 ResIII AAA_22 DEAD nSTAND3 UvrD-helicase NTPase_1 Flavi_DEAD AAA AAA_25 Helicase_RecD Herpes_ori_bp SLFN-g3_helicase NPHP3_N PhoH IstB_IS21 DnaB_C T2SSE ABC_tran AAA_7 UvrD_C_2 Zot SRP54 AAA_31 Prok-RING_1 CbiA AAA_33 VWA_2 MobB AAA_6 Motif Other DBs NCBI-GeneID:  119249879 NCBI-ProteinID:  XP_037373318 LinkDB All DBs Position Unknown AA seq 986 aa AA seqDB search MASATVESFVAKQLDLLELERDAEVEERRSWQEHISLKELQSRGVCLLKLQVSSQRTGLY GRLLVTLEPRRCAAATLLPSNSFTPGDIVGLYEANEGGQLATGILTRITQKSVTVAFDET RDVQLSSDRENSYRLVKLANDVTYKRLKRALVALRKHHSGPASPLIEVLFGGSAPSPARD TGPLTFANTSLDASQQEAVSFALSQKELAIIHGPPGTGKTTTVVEVIQQVVKQGLKVLCC APSNVAVDNLVERLARSKLRLLRLGHPARLLESTQQHSLDAVLARGDGARIVADIRKDID QALARSRKTQDKGERSSFRDEVRQLRKELKEREEAATLESLRSADVVLATNTGASPDGPL KLLPDGAFDVVVIDECGQALEASCWIPLLKAGKCILAGDHKQLPPTITSHKAAQAGLALS LMERLAEERGPGVVCTLTVQYRMHRAIMQWASEALYGGQLTAHPSVAEHLLRDLPGVADT EETGTPLLLVDTAGCGLFEMDQEDEQSKGNLGEVRLVSLHVQALVDAGVPARDVAIITPY NLQVDLLRQSLSHKHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAV TRARRHVAVVCDSRTVGSHAFLRTLLDYVAEHGEVRTAFEYLDDLVPENYSHESTPGPGR AGAKPAGPSMARKPAGGRRQAAPEARAAARPAQGRPGGKQPGPEVPPQPGPGGAESSSGG AAHFRAVLEEFVGSTRAQLEFPASLSARDRMLVHQAAEELGLRHDSAGEGKRRFITVTKR APAAPPPPGPGRASLPPAASSLSASEPPPREPRGPEQPDLKAPHLERLPRAGGQQEPAAE RALHAAASGPRKVPDRKKKREVKGPALLDLPAEEDFDALVSAAVKADNTCGFAKCSASVA TLGQLCPHCGRRYCLSHHLPEVHGCGEKARAHARQRLSREGVLYPGSGTKDRSLDPAKRA QLQRRLDKKLDELTSQRKSRRKDREK NT seq 2961 nt NT seq  +upstreamnt  +downstreamnt atggcctcggccaccgtggagagcttcgtggccaaacagttggacctgctggagctcgag agagacgccgaggtcgaggagcgcaggtcctggcaggagcacatctccctgaaagagctg cagagccgtggggtgtgtctgctgaagctgcaggtgtccagccagaggaccgggctgtac ggacggctgctggtcaccttggagccccggagatgtgcagcagcgaccctgcttcccagc aacagctttacccccggtgacatagtgggcctgtatgaggcgaacgagggcgggcagctg gccaccgggatcctgacccggatcacccagaaatcggtcacggtggccttcgacgagacc cgggacgtccagctgagctcggaccgagagaattcctaccgactggtgaaacttgcgaac gacgtcacttacaagcgtctgaaaagagccctcgtcgccctcaggaagcaccattctggc cccgcctccccgctgatcgaggtcctcttcgggggatcggcccccagcccggccagggac actggccccctgaccttcgcgaacacgtccctggatgcctcccagcaggaagcagtttcc tttgcgctgtcccagaaagagctggccatcatccacggcccccccggcaccgggaagacc acgacggtggtggaggtcatccagcaggtggtgaagcagggcctcaaggttctgtgctgt gcaccctccaatgtggccgtggacaacctggtggagcggctggcacggagcaagctgagg ctcctgcgcctgggccaccctgcccgcctgctcgagtccacccagcagcactcgctggac gctgtcctggcgcggggcgatggcgcccgcatcgtggctgacatcaggaaggacatcgac caggccttggcgaggagcaggaagacccaggataagggggagagaagcagctttcgagat gaagtccggcagctgaggaaggagctgaaggagcgggaggaggcggcgacgctggagagc ctccgctcggccgacgtggtcctggccaccaacacaggtgcgtccccggacggccccctg aagctgctgcccgacggcgccttcgacgtggtggtcattgacgagtgtgggcaggcgctg gaggccagctgctggatccccctgctgaaggcggggaagtgcatcctggcgggtgaccac aagcagctgccccccactattacctcccacaaggctgcgcaggcggggctggcgctcagc ctgatggagcggctggcggaggagcggggccccggcgtggtgtgcacgctgaccgtgcag taccgcatgcaccgcgccatcatgcagtgggcctcggaggcgctgtacggcgggcagctc acagcccacccttccgtggcggagcacctcctgcgggacctcccaggagtggctgacacg gaggagacgggcacgcccctgctgctggtggacacggctggctgcgggctgttcgagatg gaccaggaggacgagcagtctaaggggaaccttggtgaagtgcgcctggtcagcctgcat gtccaggccctggtggacgctggggtcccggcaagggacgtggccatcatcacgccgtac aacctccaggtggacctgctccggcagagcctcagtcacaagcaccccgagcttgagatc aagtccgttgatggcttccaaggccgagagaaggaggccgtgattctgtccttcgtcagg tccaacaggaaaggggaggttggcttcctggccgaggaccggcgcatcaacgtggccgtg acccgcgctcggcgccacgtggccgtcgtctgcgactcccgcacggtgggcagccacgcc ttcctgaggaccctgctggactacgtcgcggagcacggcgaggtgcgcaccgccttcgag tacctggacgacctcgtcccggagaactattcccacgagagcaccccgggccccggccga gcaggcgcgaagcccgcggggccctcgatggccaggaagcccgcgggcgggcggcggcag gcggccccggaggcccgagcagctgccaggccggcccaggggcgaccaggcggcaagcag cccggcccggaggtcccgccgcagcctgggcccgggggcgcggagagcagcagcggcggc gcagcccacttccgggccgtgctggaggagtttgtggggagcacgcgcgcgcagctggag ttccccgcgtccctgagcgcccgcgacaggatgctggtgcaccaggcggccgaggagctg gggctgcggcacgacagcgccggggagggcaagaggaggttcatcaccgtgaccaagagg gccccggccgccccgccgccccccggccccggcagagcctccctccctcccgcagcctcc agcctctccgccagcgagcccccgcccagggagccccgcggcccggagcagccggacctg aaggccccgcacctggagcggctgccgagggccggtggccagcaggagcctgcagccgag agggcactgcacgccgcagcctcagggccgcgcaaggtgcccgacaggaagaagaaacga gaagtgaaagggccggcgctcctggacctgcccgccgaggaggacttcgacgccctggtc tcggccgccgtgaaggcggataacacctgcggctttgctaagtgctcggccagcgtggcc accctgggccagctctgcccgcactgcggccgccgctactgcctcagccaccacctgccc gaggtccacggctgcggggagaaggcgcgtgcccacgcccggcagaggctcagccgggaa ggagtcctctacccgggtagcggcaccaaggaccggtccctggacccagccaagcgggcc cagctgcagaggaggctggataaaaagctggacgaactgaccagccagaggaagagcaga cggaaggacagggagaagtga

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