Talpa occidentalis (Iberian mole): 119249987
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Entry
119249987 CDS
T07495
Symbol
SYVN1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod04120
Ubiquitin mediated proteolysis
tod04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119249987 (SYVN1)
04120 Ubiquitin mediated proteolysis
119249987 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tod04121
]
119249987 (SYVN1)
Enzymes [BR:
tod01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119249987 (SYVN1)
Ubiquitin system [BR:
tod04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119249987 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
119249987
NCBI-ProteinID:
XP_037373493
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MFRTAVMMAASMALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVFVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMCLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAVDNVCIICREEMVT
GAKRLPCSHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQXPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPSSTTAALSRPSGAA
TSTAGTSTQAPGSAPEAGPTTGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEELRA
LEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSANPTEETASTAV
AAASSTSTPSSEAATPLPGVSPPAPEPEKPPAPESVGTEDLPEDGEPDAAELRRRRLQKL
ESPVAH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgccgtgatgatggcggccagcatggcgctgaccggggccgtggtggcc
catgcctactacctcaagcaccagttctaccccactgtggtgtacctgaccaagtccagc
cccagcatggccgtcctgtacatccaggccttcgtctttgtcttcctcttgggcaaggtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacctgtctggctttcactgtctttcgggatgacttcagc
ccccgctttgtggcactcttcactctcctcctcttcctcaagtgttttcactggctggct
gaggaccgcgtagactttatggaacgcagccccaacatctcctggctctttcactgccgc
atcgtctccctgatgtgcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagtatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgacgatggtgctcaccatcttcatcaagtacgtgctgcactccgtggacctccag
agcgacaacccctgggacaacaaggccgtgtacatgctctacaccgagctgttcacaggc
ttcatcaaggtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacacgttc
ccgcttttcgccatccggcccatgtacctggccatgaggcagttcaagaaagcagtgaca
gatgccatcatgtctcgccgcgccattcgcaacatgaacacactgtacccagatgccacc
ccggaggagctgcaggccgtggacaacgtctgcatcatctgccgagaagagatggtgacc
ggcgccaagagactgccctgcagccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgtccaacctgccgcatggatgtcctgcgggcctcgctacccgcg
cagntcccaccgccccccgagcctgcggaccaggggccaccgcctgccccccacccacca
ccgctcctgccgcagccccccaactttccccagggcctcctgcccccctttcctccaggc
atgttcccactgtggccccccatgggcccatttccacctgtcccgccaccccccagctca
ggagaggctgcagccccttcgtccaccactgcagcactgtcccggcccagcggagcagcc
actagcacagctggcacctccacccaggcacctggctctgcccccgaggcaggccccacc
acaggcttccccttccctcctccctggatgggcatgccactgcctcccccctttgccttc
cccccaatgcctgtaccccccgccggctttgctggcctgacccctgaggagctgcgtgcg
ctagagggccatgagcggcagcacctagaggcccggctgcagagcctgcgcaacatccac
acgctgctggacgccgccatgctgcagatcaaccagtacctcactgtgctcgcctccctg
gggcctccccggcctgccacctcagccaaccccactgaagagactgcctcgacagctgtt
gctgctgcctcctccaccagcacccccagctcggaggccgccaccccattgccaggagtc
tccccacctgcccctgaacctgaaaagcctccagctcctgagtctgtgggcactgaagac
ctgcctgaggacggggagcctgatgcagcagaactccgccgccgtcgcctgcagaagctg
gagtcgcccgttgcccactga
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