KEGG   Talpa occidentalis (Iberian mole): 119250038
Entry
119250038         CDS       T07495                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
tod  Talpa occidentalis (Iberian mole)
Pathway
tod03420  Nucleotide excision repair
tod04120  Ubiquitin mediated proteolysis
tod05161  Hepatitis B
tod05170  Human immunodeficiency virus 1 infection
tod05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:tod00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119250038 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119250038 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    119250038 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    119250038 (DDB1)
   05161 Hepatitis B
    119250038 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tod04121]
    119250038 (DDB1)
   03400 DNA repair and recombination proteins [BR:tod03400]
    119250038 (DDB1)
Ubiquitin system [BR:tod04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     119250038 (DDB1)
DNA repair and recombination proteins [BR:tod03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      119250038 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119250038 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 119250038
NCBI-ProteinID: XP_037373581
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGSVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHIEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcgcagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttgaacctgttgattgccaaaaacacaaggttagag
atctatgtggtcaccgctgaggggcttcgacctgtcaaagaggtgggcatgtatgggaag
attgctgtcatggagctttttagacccaagggggagagcaaggacctcctgtttatcctg
acagcgaaatacaatgcctgcatcctggagtacaagcagagtggcgagagcattgacatt
ataacgagggcccatggcaatgtccaggaccgcatcggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgactctatgatggccttttc
aaggttattccactggaccgagataacaaagagctcaaggcctttaacattcgcctggag
gagctgcatgtcatcgacgtcaagttcttatatggttgccaagcacccaccatctgcttt
gtctaccaggacccacagggacggcatgtcaaaacctacgaggtgtctctccgagagaag
gagttcaataagggcccttggaagcaggaaaatgtagaagctgaagcttccatggtgata
gcagtcccagagccctttgggggtgccatcatcattgggcaggagtcaatcacctatcac
aatggcgacaaatacctggcgattgccccgcctatcatcaagcaaagcacaattgtgtgt
cacaatcgagtggaccccaacggttcccgctatctgctgggggacatggagggacggctc
ttcatgctgctcttggagaaggaggagcagatggacggcagcgtcaccctcaaggacctc
cgcgtggaactcctcggagagacctcgattgctgaatgcttgacgtatcttgataatggt
gttgtgtttgtcgggtctcgccttggtgactcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaacttaggacctattgtg
gacatgtgtgtggtggacctggagaggcaggggcagggacagctggtcacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaattggaatccacgagcatgcc
agcattgacctaccaggcatcaaaggcctgtggccactgcggtctgaccctagccgggag
actgacgacaccttggtgctttcttttgtgggccagacaagagtcctcatgttaaacgga
gaggaggtggaagaaaccgagctgatgggtttcgtggatgaccagcagaccttcttctgt
ggtaacgtggctcatcagcagctcatccagatcacttcagcatctgtcaggttggtctct
caagaacccaaagctcttgtcagtgagtggaaggagcctcagggcaagaacatcagtgtg
gcttcctgcaacagcagccaggtggtagtggccgtgggaagggctctttactacctgcag
atccatcctcaggaactccggcagatcagccacatagagatggaacacgaagtggcctgc
ttggacattaccccgctaggagatagcaatggactatcccctctttgtgccattggcctc
tggacagacatctcagcccgtattttgaagctgccctcctttgaacttctgcacaaagag
atgctgggtggagaaatcattccccgctccatcctgatgaccacctttgagagtagccac
tacctcctttgtgccttgggagatggggcacttttctacttcggactcaacattgagaca
ggcctgttgagcgaccgtaagaaggtgaccctgggcacccagcccacggtgttgcggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaattcagatggctatcccgacagcctggccctggcaaacaacagcaccctcacc
attggcaccatcgacgagatccagaagctgcatattcgcactgttcccctctatgagtct
cccagaaagatctgctatcaggaagtgtcccagtgctttggggtcctttccagccgtatt
gaagtccaggacacaagcgggggcacgactgccttgcggcccagtgccagcacgcaggcc
ctgtccagcagcgtcagctccagcaagctgttctccagcagcacagcccctcacgagacc
tccttcggagaagaggtggaggtgcacaacctcctcatcatcgaccagcacacctttgaa
gtgcttcatgctcaccagtttctgcagaacgagtatgccctcagcctggtctcctgcaaa
ttgggcaaagaccccaacacgtacttcatcgtgggcacagccatggtgtatcctgaagag
gcggaacccaagcagggccgcattgtggtctttcagtattcagacggaaaactacagacc
gtggctgaaaaggaagtgaaaggggccgtgtactcgatggtggagtttaacgggaagctc
ttagccagcatcaacagcacggtgcggctgtacgagtggacgacggagaaggagctccgc
acggagtgcaaccactacaacaacatcatggcgctctacctgaagactaagggcgacttc
atcctggtgggggacctgatgcgctcggtgctgctgctcgcctacaagcccatggagggg
aacttcgaagagattgctcgagactttaaccccaactggatgagtgctgtggaaatcctg
gatgatgacaatttcctgggggccgagaatgcgtttaacttgtttgtgtgtcagaaggat
agtgctgccaccaccgacgaagagcggcaacacctccaggaggtcggtctcttccacctg
ggcgagttcgtgaatgtcttttgccacggctccctggtgatgcagaacctgggcgagacg
tccacccccacacagggctccgtgctctttggcacagtcaatggcatgattgggctggtg
acctcgctgtcagagagctggtacaacctcctgttggacatgcagaatcggctcaataaa
gtcatcaaaagtgtgggcaagatcgagcactccttctggaggtccttccatactgagcga
aagacagaaccggccaccggcttcatcgatggagacttgattgagagtttcctggacatc
agcaggcccaagatgcaggaggtcgtggccaacctacagtatgacgacggcagcgggatg
aagcgcgaggccactgccgacgacctgatcaaggttgtggaggagctcactcggatccac
tag

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