Talpa occidentalis (Iberian mole): 119250141
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Entry
119250141 CDS
T07495
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119250141 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119250141 (PATL1)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119250141 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
119250141 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
119250141
NCBI-ProteinID:
XP_037373747
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PATVNNQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMTAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLTQEMPTVSVLEYALPQRPPQGPEDERDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNSKL
LPGRVGQMLPPAPGFRAFFGAPPPATPPPQPHPPGPGPHLQNLRSQAPVFRPDTTHLHPQ
HRRLLHQRQQQNKSQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYVLSLEEERPALMEERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSLTVTSLLQQLM
NLPQSAAAPAPSNPHLTAVLQNKFGLSLLLVVLSRGEDLQSSDPAAESMQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcttttcag
ggcctgggagaagaagatgaagagattgatcagttcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcggttggctgagttggaagagaagcta
ccggcaacagttaataaccaaacaggcaatggagaaagagatgaaatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactggaa
gatccagccattatgacggccgtgcagaccaggccagttttgcaaccccaacctggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccgctgctt
actcaggaaatgcctacagtgtctgttttagaatatgccttgcctcagaggcccccacag
ggcccagaagatgagcgggacctttctgaacgtgcattaccaaggcggtcaacctcacct
atcatcgggagccctcctgtcagagctgtccccattggcactccgcctaagcagatggct
gtgcccagcttcaaccaacagattctctgtccgaagcctgtccacgttcggcccccgatg
ccgccgcgttaccctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctgctgggtcacccattcccccctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacgcatgtctcccagc
cagtttgcgcgggtccctgggtttgttggtagtccacttgctgccatgaattctaagctg
ctgccagggcgcgtggggcagatgcttcccccagcaccaggcttccgtgccttctttggt
gctccgcctcctgccacaccacctccacagccgcacccccctggccccggacctcacctg
caaaacctaagatctcaggcccctgtatttagaccagacaccactcacctacacccacag
catcgtcgactcttacatcagaggcagcaacaaaataaaagtcagcatcggaatctcaat
ggtgctggagacagaggcagtcaccgaagcagtcatcaggatcatctccgaaaggatccc
tatgccaatctcatgttacagcgggaaaaggactgggtctctaaaatccagatgatgcaa
ctacaaagcactgatccctacctggatgatttttattaccagaattacttcgaaaaactg
gagaaattgtcagctgctgaagaagtgcaaggtgatggccctaaaaaggaacgcaccaag
ctcattacgcctcaggtggccaaactcgagcatgcctataaacctgtgcagtttgaaggg
tctttgggaaaacttactgtctctagtgtgaataatccccgaaaaatgattgatgctgtt
gtgacgtctcggagcgaagatgatgagacaaaagaaaaacaggttcgggacaagagacga
aaaacccttgtcataattgagaaaacctatagtttactccttgatgtggaggattatgaa
aggcgttatgtcctcagtctagaagaagagcgacctgccttgatggaagaaagaaagcac
aaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagagaggccaagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattcttatgacaacagccaggaacctt
cctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctcctcctctatcatcttccatcattgactgtcaccagccttctgcaacagctaatg
aacctacctcagagtgcagctgcaccagcaccctccaaccctcacctcaccgctgtgctt
cagaacaagtttggcctatcgctgcttcttgtcgtcctgagccgtggggaagacctgcag
agttcagatcctgctgcagaatcaatgcagaacaaccagtggacggaggtgatgttcatg
gcaacacgagaacttctacggattccccaagcagccctggctaagccaatctccatcccc
acaaacctagtgtccctcttttctcgctatgttgaccgacagaaactgaacttgctggag
acaaaactgcagctagttcaggggatacggtaa
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